finished
This commit is contained in:
2
DNA_Alignment/.idea/.idea.DNA_Alignment/.idea/.gitignore
generated
vendored
Normal file
2
DNA_Alignment/.idea/.idea.DNA_Alignment/.idea/.gitignore
generated
vendored
Normal file
@@ -0,0 +1,2 @@
|
||||
# Default ignored files
|
||||
/workspace.xml
|
||||
21
DNA_Alignment/.idea/.idea.DNA_Alignment/.idea/contentModel.xml
generated
Normal file
21
DNA_Alignment/.idea/.idea.DNA_Alignment/.idea/contentModel.xml
generated
Normal file
@@ -0,0 +1,21 @@
|
||||
<?xml version="1.0" encoding="UTF-8"?>
|
||||
<project version="4">
|
||||
<component name="ContentModelStore">
|
||||
<e p="$USER_HOME$/Library/Caches/Rider2019.2/extResources" t="IncludeRecursive" />
|
||||
<e p="$USER_HOME$/Library/Caches/Rider2019.2/resharper-host/local/Transient/ReSharperHost/v192/SolutionCaches/_DNA_Alignment.-1495054751.00" t="ExcludeRecursive" />
|
||||
<e p="$PROJECT_DIR$" t="IncludeFlat">
|
||||
<e p="DNA_Alignment" t="IncludeRecursive">
|
||||
<e p="bin" t="ExcludeRecursive" />
|
||||
<e p="DNA_Alignment.csproj" t="IncludeRecursive" />
|
||||
<e p="obj" t="ExcludeRecursive" />
|
||||
<e p="Program.cs" t="Include" />
|
||||
<e p="Properties" t="Include">
|
||||
<e p="AssemblyInfo.cs" t="Include" />
|
||||
</e>
|
||||
<e p="writeup.txt" t="Include" />
|
||||
</e>
|
||||
<e p="DNA_Alignment.sln" t="IncludeFlat" />
|
||||
<e p="packages" t="ExcludeRecursive" />
|
||||
</e>
|
||||
</component>
|
||||
</project>
|
||||
4
DNA_Alignment/.idea/.idea.DNA_Alignment/.idea/encodings.xml
generated
Normal file
4
DNA_Alignment/.idea/.idea.DNA_Alignment/.idea/encodings.xml
generated
Normal file
@@ -0,0 +1,4 @@
|
||||
<?xml version="1.0" encoding="UTF-8"?>
|
||||
<project version="4">
|
||||
<component name="Encoding" addBOMForNewFiles="with BOM under Windows, with no BOM otherwise" />
|
||||
</project>
|
||||
8
DNA_Alignment/.idea/.idea.DNA_Alignment/.idea/indexLayout.xml
generated
Normal file
8
DNA_Alignment/.idea/.idea.DNA_Alignment/.idea/indexLayout.xml
generated
Normal file
@@ -0,0 +1,8 @@
|
||||
<?xml version="1.0" encoding="UTF-8"?>
|
||||
<project version="4">
|
||||
<component name="ContentModelUserStore">
|
||||
<attachedFolders />
|
||||
<explicitIncludes />
|
||||
<explicitExcludes />
|
||||
</component>
|
||||
</project>
|
||||
8
DNA_Alignment/.idea/.idea.DNA_Alignment/.idea/modules.xml
generated
Normal file
8
DNA_Alignment/.idea/.idea.DNA_Alignment/.idea/modules.xml
generated
Normal file
@@ -0,0 +1,8 @@
|
||||
<?xml version="1.0" encoding="UTF-8"?>
|
||||
<project version="4">
|
||||
<component name="ProjectModuleManager">
|
||||
<modules>
|
||||
<module fileurl="file://$PROJECT_DIR$/.idea/.idea.DNA_Alignment/riderModule.iml" filepath="$PROJECT_DIR$/.idea/.idea.DNA_Alignment/riderModule.iml" />
|
||||
</modules>
|
||||
</component>
|
||||
</project>
|
||||
6
DNA_Alignment/.idea/.idea.DNA_Alignment/.idea/projectSettingsUpdater.xml
generated
Normal file
6
DNA_Alignment/.idea/.idea.DNA_Alignment/.idea/projectSettingsUpdater.xml
generated
Normal file
@@ -0,0 +1,6 @@
|
||||
<?xml version="1.0" encoding="UTF-8"?>
|
||||
<project version="4">
|
||||
<component name="RiderProjectSettingsUpdater">
|
||||
<option name="vcsConfiguration" value="1" />
|
||||
</component>
|
||||
</project>
|
||||
6
DNA_Alignment/.idea/.idea.DNA_Alignment/.idea/vcs.xml
generated
Normal file
6
DNA_Alignment/.idea/.idea.DNA_Alignment/.idea/vcs.xml
generated
Normal file
@@ -0,0 +1,6 @@
|
||||
<?xml version="1.0" encoding="UTF-8"?>
|
||||
<project version="4">
|
||||
<component name="VcsDirectoryMappings">
|
||||
<mapping directory="$PROJECT_DIR$/.." vcs="Git" />
|
||||
</component>
|
||||
</project>
|
||||
7
DNA_Alignment/.idea/.idea.DNA_Alignment/riderModule.iml
generated
Normal file
7
DNA_Alignment/.idea/.idea.DNA_Alignment/riderModule.iml
generated
Normal file
@@ -0,0 +1,7 @@
|
||||
<?xml version="1.0" encoding="UTF-8"?>
|
||||
<module type="RIDER_MODULE" version="4">
|
||||
<component name="NewModuleRootManager">
|
||||
<content url="file://$MODULE_DIR$/../.." />
|
||||
<orderEntry type="sourceFolder" forTests="false" />
|
||||
</component>
|
||||
</module>
|
||||
16
DNA_Alignment/DNA_Alignment.sln
Normal file
16
DNA_Alignment/DNA_Alignment.sln
Normal file
@@ -0,0 +1,16 @@
|
||||
|
||||
Microsoft Visual Studio Solution File, Format Version 12.00
|
||||
Project("{FAE04EC0-301F-11D3-BF4B-00C04F79EFBC}") = "DNA_Alignment", "DNA_Alignment\DNA_Alignment.csproj", "{ED9116C6-3BCE-4B84-89EA-DEE30AE5FBC5}"
|
||||
EndProject
|
||||
Global
|
||||
GlobalSection(SolutionConfigurationPlatforms) = preSolution
|
||||
Debug|Any CPU = Debug|Any CPU
|
||||
Release|Any CPU = Release|Any CPU
|
||||
EndGlobalSection
|
||||
GlobalSection(ProjectConfigurationPlatforms) = postSolution
|
||||
{ED9116C6-3BCE-4B84-89EA-DEE30AE5FBC5}.Debug|Any CPU.ActiveCfg = Debug|Any CPU
|
||||
{ED9116C6-3BCE-4B84-89EA-DEE30AE5FBC5}.Debug|Any CPU.Build.0 = Debug|Any CPU
|
||||
{ED9116C6-3BCE-4B84-89EA-DEE30AE5FBC5}.Release|Any CPU.ActiveCfg = Release|Any CPU
|
||||
{ED9116C6-3BCE-4B84-89EA-DEE30AE5FBC5}.Release|Any CPU.Build.0 = Release|Any CPU
|
||||
EndGlobalSection
|
||||
EndGlobal
|
||||
BIN
DNA_Alignment/DNA_Alignment/Archive.zip
Normal file
BIN
DNA_Alignment/DNA_Alignment/Archive.zip
Normal file
Binary file not shown.
55
DNA_Alignment/DNA_Alignment/DNA_Alignment.csproj
Normal file
55
DNA_Alignment/DNA_Alignment/DNA_Alignment.csproj
Normal file
@@ -0,0 +1,55 @@
|
||||
<?xml version="1.0" encoding="utf-8"?>
|
||||
<Project ToolsVersion="4.0" DefaultTargets="Build" xmlns="http://schemas.microsoft.com/developer/msbuild/2003">
|
||||
<Import Project="$(MSBuildExtensionsPath)\$(MSBuildToolsVersion)\Microsoft.Common.props" Condition="Exists('$(MSBuildExtensionsPath)\$(MSBuildToolsVersion)\Microsoft.Common.props')" />
|
||||
<PropertyGroup>
|
||||
<Configuration Condition=" '$(Configuration)' == '' ">Debug</Configuration>
|
||||
<Platform Condition=" '$(Platform)' == '' ">AnyCPU</Platform>
|
||||
<ProjectGuid>{ED9116C6-3BCE-4B84-89EA-DEE30AE5FBC5}</ProjectGuid>
|
||||
<OutputType>Exe</OutputType>
|
||||
<AppDesignerFolder>Properties</AppDesignerFolder>
|
||||
<RootNamespace>DNA_Alignment</RootNamespace>
|
||||
<AssemblyName>DNA_Alignment</AssemblyName>
|
||||
<TargetFrameworkVersion>v4.7.2</TargetFrameworkVersion>
|
||||
<FileAlignment>512</FileAlignment>
|
||||
</PropertyGroup>
|
||||
<PropertyGroup Condition=" '$(Configuration)|$(Platform)' == 'Debug|AnyCPU' ">
|
||||
<PlatformTarget>AnyCPU</PlatformTarget>
|
||||
<DebugSymbols>true</DebugSymbols>
|
||||
<DebugType>full</DebugType>
|
||||
<Optimize>false</Optimize>
|
||||
<OutputPath>bin\Debug\</OutputPath>
|
||||
<DefineConstants>DEBUG;TRACE</DefineConstants>
|
||||
<ErrorReport>prompt</ErrorReport>
|
||||
<WarningLevel>4</WarningLevel>
|
||||
</PropertyGroup>
|
||||
<PropertyGroup Condition=" '$(Configuration)|$(Platform)' == 'Release|AnyCPU' ">
|
||||
<PlatformTarget>AnyCPU</PlatformTarget>
|
||||
<DebugType>pdbonly</DebugType>
|
||||
<Optimize>true</Optimize>
|
||||
<OutputPath>bin\Release\</OutputPath>
|
||||
<DefineConstants>TRACE</DefineConstants>
|
||||
<ErrorReport>prompt</ErrorReport>
|
||||
<WarningLevel>4</WarningLevel>
|
||||
</PropertyGroup>
|
||||
<ItemGroup>
|
||||
<Reference Include="System" />
|
||||
<Reference Include="System.Core" />
|
||||
<Reference Include="System.Data" />
|
||||
<Reference Include="System.Xml" />
|
||||
</ItemGroup>
|
||||
<ItemGroup>
|
||||
<Compile Include="Program.cs" />
|
||||
<Compile Include="Properties\AssemblyInfo.cs" />
|
||||
</ItemGroup>
|
||||
<ItemGroup>
|
||||
<Content Include="writeup.txt" />
|
||||
</ItemGroup>
|
||||
<Import Project="$(MSBuildToolsPath)\Microsoft.CSharp.targets" />
|
||||
<!-- To modify your build process, add your task inside one of the targets below and uncomment it.
|
||||
Other similar extension points exist, see Microsoft.Common.targets.
|
||||
<Target Name="BeforeBuild">
|
||||
</Target>
|
||||
<Target Name="AfterBuild">
|
||||
</Target>
|
||||
-->
|
||||
</Project>
|
||||
273
DNA_Alignment/DNA_Alignment/GreatApes.txt
Normal file
273
DNA_Alignment/DNA_Alignment/GreatApes.txt
Normal file
@@ -0,0 +1,273 @@
|
||||
gtttatgtag cttacctccc caaagcaata cactgaaaat gtttcgacgg gctcacatca
|
||||
ccccataaac aaataggttt ggtcctagcc tttctattaa ctcttagtag gattacacat
|
||||
gcaagcatcc ccgccccagt gaatcaccct ctaaatcacc acgatcaaaa ggaacaagca
|
||||
tcaagtacgc agaaatgcag ctcaaaacgc ttagcctagc cacaccccca cgggggacag
|
||||
cagtgattaa cctttagcaa taaacgaaag tttaactaag ccatactaac cccagggttg
|
||||
gtcaatttcg tgccagccac cgcggtcaca cgattaaccc aagccaatag aaatcggcgt
|
||||
aaagagtgtt ttagatcaat ccccaataaa gctaaaattc acctgagttg taaaaaactc
|
||||
cagctgatat aaaataaact acgaaagtgg ctttaatata tctgaacaca caatagctag
|
||||
gacccaaact gggattagat accccactat gcctagccct aaacttcaac agttaaatta
|
||||
acaagactgc tcgccagaac actacgagcc acagcttaaa actcaaagga cctggcggtg
|
||||
cttcatatcc ctctagagga gcctgttctg taatcgataa accccgatca acctcaccac
|
||||
ctcttgctca gcctatatac cgccatcttc agcaaaccct gatgaaggcc acaaagtaag
|
||||
cacaagtacc cacgtaaaga cgttaggtca aggtgtagcc catgaggtgg caagaaatgg
|
||||
gctacatttt ctacttcaga aaactacgat aacccttatg aaacctaagg gtagaaggtg
|
||||
gatttagcag taaactaaga gtagagtgct tagttgaaca gggccctgaa gcgcgtacac
|
||||
accgcccgtc accctcctca agtatacttc aaaggacatt taactaaaac ccctacgcat
|
||||
ctatatagag gagataagtc gtaacatggt aagtgtactg gaaagtgcac ttggacgaac
|
||||
cagagtgtag cttaacacaa agcacccaac ttacacttag gagatttcaa ctcaacttga
|
||||
ccgctctgag caaaacctag ccccaaaccc accccacatt actaccaaac aactttaatc
|
||||
aaaccattta cccaaataaa gtataggcga tagaaattgt aaatcggcgc aatagatata
|
||||
gtaccgcaag ggaaagatga aaaaatataa ccaagcacga cacagcaagg actaacccct
|
||||
gtaccttctg cataatgaat taactagaaa taactttgca aagagaaccg aagctaagac
|
||||
ccccgaaacc agacgagcta cctaagaaca gctaaaagag cacacccgtc tatgtagcaa
|
||||
aatagtggga agattcctag gtagaggcga caaacctacc gagcctggtg atagctggtt
|
||||
gtccaagaca gaatcttagt tcaactttaa atttacccac agaaccctcc aaatcctccc
|
||||
gtaaatttaa ctgttagtcc aaagaggaac agctctttgg acactaggaa aaaaccttgt
|
||||
aaagtgagta aaaaatttaa tacccatagt aggcctaaaa gcagccacca attaagaaag
|
||||
cgttcaagct caacactatc acccaaaata atcccaaaca cacaactgaa ctccctacac
|
||||
ccaattggac caatctatta ccctatagaa gagctaatgt tagtataagt aacatgaaac
|
||||
cattctcctc cgcataagcc tacatcagac caaaatatta aactgacaat taacaactca
|
||||
atatctacaa ctaaccaaca agctattatt acccccactg ttaacccaac acaggcatgc
|
||||
ccacgaggaa aggttgaaaa aagtaaaagg aactcggcaa attttacccc gcctgtttac
|
||||
caaaaacatc acctctagca ttaccagtat tagaggcacc gcctgcccag tgacatgcgt
|
||||
tcaacggccg cggtacccta accgtgcaaa ggtagcataa tcacttgttc cttaaatagg
|
||||
gactcgtatg aatggctcca cgagggttca gctgtctctt acttttgacc agtgaaattg
|
||||
acctgcccgt gaagaggcgg acataacata acaagacgag aagaccctat ggagctttaa
|
||||
ttcattaatg caagcaacac ttaataaacc cacaggtcct aaactaccaa acctgcatta
|
||||
aaaatttcgg ttggggcgac ctcggagtat aatctaacct ccgaacaaca catgccaaga
|
||||
cttcaccagt caaagcgagc taccacattt aattgatcca atgacttgac caacggaaca
|
||||
agttacccta gggataacag cgcaatccta ttctagagtc catatcaaca gtagggttta
|
||||
cgacctcgat gttggatcag gacatcccga tggtgcagcc gctatcaaag gttcgtttgt
|
||||
tcaacgatta aagtcctacg tgatctgagt tcagaccgga gtaatccagg tcggtttcta
|
||||
tctattccgt gtttctccct gtacgaaagg acaagagaaa cgaggcctac ttcacaaagc
|
||||
gcctcccccc gtaaatgata ctatctcaat ttaatatagc gcccacatct actcaagaat
|
||||
agggtttgtt aagatggcag agcccggtaa tcgcataaaa cttaaaactt tatagtcaga
|
||||
ggttcaattc ctcttcttaa caatatatcc atggctaacc ttctactcct cattgtacct
|
||||
atcctaatcg ccatagcatt cctaatgcta accgaacgaa aaattttagg ctatatacaa
|
||||
ctacgtaaag gccccaacgt cgtaggcccc tacgggctac tacaaccctt cgctgacgcc
|
||||
ataaaactct tcaccaaaga gcccctaaaa ccctcaacat caaccatcac cctctacatc
|
||||
accgccccaa ccttagctct cactattgcc ctactattat gaacccccct ccccataccc
|
||||
aaccccctag tcaatctcaa tctaggcctc ctattcatcc tagccacctc tagcctagcc
|
||||
gtttactcca tcctctgatc agggtgggca tcaaactcaa actacgcctt gatcggcgca
|
||||
ctacgagcag tagcccaaac aatctcatat gaagtcaccc tggccattat cctactatca
|
||||
acactactga tgaatggttc ctttaacctc tccaccctca tcataacaca agaacacctc
|
||||
tgactgctcc taccaacatg acccttagct ataatatgat ttatctccac attagcagaa
|
||||
accaaccgga cccccttcga cctcgctgaa ggagaatctg aactagtctc aggctttaat
|
||||
atcgaatatg ccgcaggccc cctcgcccta tttttcatag ccgagtacat aaatattatc
|
||||
ataataaata ctctcaccac tataattttc ctaggaacaa catacaatgc ccactcccct
|
||||
gaactctaca cagtatgctt catcaccaaa accctgcttc taacctctct attcctatga
|
||||
attcgaactg catatcctcg atttcgctac gaccaactca tgcacctcct gtgaaaaaac
|
||||
ttcttgccac tcaccctggc actactcata tgatatattt ccatacctac cacaatctcc
|
||||
agcattcccc ctcaaaccta agaaatatgt ctgataaaag agttactttg atagagtaaa
|
||||
taatagaggt ttaaaccccc ttatttctag gactatgaga attgaaccca tccctgagaa
|
||||
tccaaaattc tccgtgccac ctgtcacacc ccatcctaaa gtaaggtcag ctaaataagc
|
||||
tatcgggccc ataccccgaa aatgttggtc acatccttcc cgtactaatt aaccccctgg
|
||||
cccaacccat catctactct accatcttcg caggcactct tattacagca ctaagctccc
|
||||
actgattttt tgcctgagta ggcctagaaa taaacatact agcttttatc ccagtcctaa
|
||||
ccaaaaaaat aaatccccgc tccacagaag ccgccatcaa atatttcctc acacaagcaa
|
||||
ctgcatccat aatcctccta atagccatcc tctccaacaa catactctcc ggacaatgaa
|
||||
ccacaaccaa tgccactaat caatactcat cattaatgat cgtagtagct atagctataa
|
||||
aactaggaat agcccccttt cacttctgag tgccagaagt cacccaaggc acccccctaa
|
||||
tgtctggcct actcctcctc acatgacaaa aactagcccc tatgtcaatc atataccaaa
|
||||
tttcctcgtc aacaaatgta agccttctcc tcactctttc aatcctatcc atcctagcag
|
||||
gcagctgagg cggactaaac caaactcaac tacgcaagat tctagcatac tcctcaatca
|
||||
cccatgtagg atgaataata gcagttctac catataaccc taatataact attcttaatc
|
||||
tgaccattta tattatcctc actactacca cattcctatt actcaaccta agctccagca
|
||||
ccacaacctt actactatct cgtacttgaa ataaactgac atgattaaca cctctaatcc
|
||||
cctccaccct cctctcccta ggaggtctac ccccactaac cggcttccta cccaaatggc
|
||||
ttattatcga agaattcaca aaaaataacg acctcattac ccccaccatt atggccatca
|
||||
tcaccctcct caacctctat ttctatctac gcctaattta ctccacctct atcacactac
|
||||
tacccatatc caacaacgta aagataaaat gacagctcga atatactaaa cccactccct
|
||||
tcctccctac acttatcaca ctcaccaccc tacttctacc catctccccc ttcatactaa
|
||||
tagttctata gaaatttagg ttaaacatag accaagagcc ttcaaagccc ttagtaagtt
|
||||
acaacactta atttctgcaa caactaagga ctgcaaaacc ctactctgca tcaactgaac
|
||||
gcaaatcagc cactttaatt aagctaagcc cttactagat caatgggact caaacccaca
|
||||
aacatttagt taacagctaa acaccctagt caactggctt caatctactt ctcccgccgc
|
||||
aagaaaaaaa ggcgggagaa gccccggcag gtttgaagct gcttcttcga atttgcaatt
|
||||
caatatgaaa ttcacctcgg agctggtaaa aagaggccca gcctctgtct ttagatttac
|
||||
agtccaatgc cttactcagc cattttacct ccttttttcc actgatgttc accgaccgct
|
||||
gattattctc tacaaaccat aaagatattg gaacactata tctactattc ggcgcatgag
|
||||
ctggagtcct aggcacagcc ctaagtctcc ttattcgagc agaacttggt caaccaggca
|
||||
accttctagg taacgatcac atctataatg ttatcgtcac agcccatgcg ttcgtaataa
|
||||
ttttcttcat agtaatgcct atcataatcg gaggctttgg caactggcta gtacccttaa
|
||||
taattggtgc ccccgacatg gcattccccc gcataaacaa cataagcttc tgactccttc
|
||||
ccccttcttt cctacttctg ctcgcatccg ctatagtaga agccggcgca gggactggtt
|
||||
ggacagtcta ccctccctta gcaggaaatt attcccaccc cggagcttct gtagacctaa
|
||||
ccattttttc cctacaccta gcaggcatct cctctattct aggggccatc aacttcatta
|
||||
caacaatcat caatataaaa ccccccgcca taacccaata ccaaacaccc cttttcgtct
|
||||
gatccgtcct aatcacagca gtcttacttc ttctatctct cccagtacta gctgctggaa
|
||||
ttaccatatt attaacagac cgtaacctca acaccacctt tttcgaccca gccggaggag
|
||||
gagatcctat cctataccaa cacttattct gattttttgg acaccccgaa gtttacattc
|
||||
taatcctacc aggcttcgga ataatctccc acattgtaac ttattactcc ggaaaaaaag
|
||||
aaccattcgg atatataggt atagtctgag ctataatatc aattggtttc ctgggattta
|
||||
ttgtgtgagc ccaccacata tttacagtag gaatagacgt agatacacga gcctacttca
|
||||
cctccgctac cataatcatc gctatcccca ccggcgtcaa agtattcagc tgactcgcta
|
||||
cactccatgg aagtaatacc aaatgatctg ccgcaatgct ctgagcccta gggttcattt
|
||||
ttctcttcac tgtaggcggc ctaaccggca tcgtactagc aaactcgtca ttagatatcg
|
||||
tgctgcacga cacatattac gtcgtagctc acttccacta tgtcctatct ataggagctg
|
||||
tgttcgccat catagggggc tttattcact gatttcccct attctcaggc tacactctag
|
||||
atcaaaccta cgccaaaatc cactttgcca tcatattcat tggcgttaat ctaaccttct
|
||||
tcccacaaca ctttcttggc ctatctggaa taccccgaca ttactcggac taccccgatg
|
||||
catatactac atgaaatatc ctgtcatccg tgggctcatt catttcccta acagcagtaa
|
||||
tattaataat ttttataatc tgagaagcct tcgcctcaaa acgaaaagtc ctaataatcg
|
||||
aagaaccctc cacaaatctg gagtgactgt atggatgccc tccaccctat catacatttg
|
||||
aagagtctgt atatataaag tctaaacaaa aaaggaagga atcgaacccc ccaaagctgg
|
||||
tttcaagcca accccatgac cttcatgact ttttcaaaaa gatattagaa aaactatttc
|
||||
ataactttgt caaggttaaa ttacgggtta aaccccgtat atcttaatgg cacatgcagc
|
||||
gcaagtaggt ctacaagacg ctacttctcc tatcatagaa gaactaatca tctttcatga
|
||||
tcatgccctc ataatcattt ttctcatctg cttcttagtc ctgtacgccc ttttcctaac
|
||||
actcacaaca aagctaacta acaacaacat ctcagacgcc caagaaatag agaccatctg
|
||||
aaccatcctg cccgctatta tcttagtcct gatcgccctc ccatctctac gaatcctcta
|
||||
tatgacagat gaaatcaatg acccctcctt cactatcaaa tcaatcggtc accaatgata
|
||||
ctgaacctac gaatacaccg actatggtgg attgatcttt aactcctata tactcccccc
|
||||
attattccta gaaccaggtg acctacgact ccttgacgtc gacaaccgag tagtccttcc
|
||||
agttgaagcc cccgtccgta taataattac atcccaagat gtcttacact catgagctgt
|
||||
tcccacatta ggcctaaaaa cagacgcaat ccccgggcgc ctgaaccaaa ccacattcac
|
||||
cgccacacga ccaggagtat actacggcca gtgctcagaa atctgtggag ccaaccacag
|
||||
ttttatgccc attgttctag agctaatccc cctaaaaatc tttgaaatag gacccgtatt
|
||||
cgccctataa tacccctctc atccctctcc agagctcact gtaaagctaa cctagcgtta
|
||||
accttttaag ttaaagatta agagtatcgg cacctctttg cagtgaaatg ccccagctaa
|
||||
ataccaccgt atggcccacc ataattgccc caatactcct cacactattt ctcattaccc
|
||||
aactaaaagt tttaaacaca aattaccacc tacccccctt accaaaaact ataaaaataa
|
||||
aaaacttctg taaaccctga gaaccaaaat gaacgaaaat ttattcgctt cattcattgc
|
||||
ccccacaatc ctaggcttac ccgccgcagt attaattatc ctacttcccc ctctactgat
|
||||
ccccacctcc aaatatctca tcaacaaccg actgattgcc acccaacagt gactaatcca
|
||||
actaacctca aaacaaataa taactataca taacgccaag ggacgaacct gatcccttat
|
||||
gttaatatga ttaattattt ttattgccac aaccaacctc ctcggactct tgccccactc
|
||||
attcacacca actacccagc tatctataaa cctggccata gccatccccc tgtgagcagg
|
||||
cgcagtaact acaggctttc gctccaagac taaaaatgcc ctagcccacc tactaccaca
|
||||
aggcacccct acacccctta tccctatact agtcatcatt gaaaccatca gcctattcat
|
||||
ccaaccaata gccctagctg tacgcctaac cgctaacatc actgcaggtc acctacttat
|
||||
gcacctaatc ggaagcgcca cactagcaat atcaactacc aatcttccct caacactcat
|
||||
tatctttaca gtcctaattt tattaactat actagaaatc gctgtcgccc tcatccaagc
|
||||
ctacgttttc acacttttag tgagcctcta cctgcacgag aacacataat gatccaccaa
|
||||
tcacatgcct atcacatagt aaaacccagc ccatgacccc taacaggggc cctctcagcc
|
||||
ctcctaataa cctcaggctt agccatatga ttccacttcc actctacaac cctactcata
|
||||
ctaggcctac taaccaacat actaactata taccaatgat gacgtgatgt aatgcgagaa
|
||||
agcacgtacc aaggccacca tacactaccc gtccaaaaag gcttacgata tggaatgatc
|
||||
ctatttatta cctcagaagt ctttttcttc gcaggattct tctgagcttt ctaccactcc
|
||||
agcctagccc ctacccctca actaggagca cactgacccc caacaggcat caccccacta
|
||||
aaccccctag aagttccact tttaaataca tctgtactgc tcgcatcagg tgtctcaatt
|
||||
acctgagccc accatagcct aatagaaaat aaccgtaacc aaataattca agcactactt
|
||||
atcacaattt tactgggcct ctacttcacc ctcctacaag cctcagagta ctttgaagcc
|
||||
ccctttacca tttccgatgg tatctatggc tcaacatttt ttgtagccac aggctttcac
|
||||
gggctccacg tcatcattgg gtcaactttc ctcactatct gtcttattcg ccaactaata
|
||||
tttcacttta catccaaaca ccacttcggc ttcgaagccg ccgcttggta ttggcacttc
|
||||
gtagatgtag tctgactatt cctatacgtc tccatctact gatgagggtc ctactctttt
|
||||
agtataatta gtaccgttaa cttccaatta accagttttg gtagtaccca aaaaagagta
|
||||
ataaacttcg ccctgatctt aataaccaac acccttctag ccctactact aataattatt
|
||||
acattttgac taccgcaact taacagctac atagaaaaaa ctaaccccta cgaatgtggt
|
||||
ttcgaccccg tatcccccgc ccgcattcct ttctccataa aatttttcct agtagccatc
|
||||
actttcttac tatttgacct agaaattgcc ctcctattgc ccctgccatg agccctacaa
|
||||
acaaccaact taccactaat agtcatgtca tccctcttat taatcattat cctaacccta
|
||||
agtctagcct acgaatgact gcaaaaagga ctagactgga ccgaattggt acatagttta
|
||||
aacaaaacga atgatttcga ctcattaaat tatgataatc atatttacca aatgcccctt
|
||||
atttacataa acattatact agcatttacc atctcacttc taggaatact agtgtaccgt
|
||||
tcacacctaa tatcctccct actatgccta gaaggaataa tattatcact attcattata
|
||||
gctactctca taaccctcaa tacccacttc ctcttagcta acattgtacc catcaccata
|
||||
ctagtctttg ctgcctgtga agcagcagta ggcctagccc tactagtctc aatctctaac
|
||||
acatatggtc ttgactatgt acaaaaccta aacctgctcc aatgctaaaa ctaatcgccc
|
||||
caacaattat actactaccg ctaacatgac tctccaaaaa acatataatt tgaatcaaca
|
||||
caaccaccca cagcctaatc atcagcatca ttcccctact attttttaac caaattaata
|
||||
acaatctatt tagttactcc ctatcttttt cctccgaccc cctaacgacc cccctcctaa
|
||||
tattaactac ctgactccta ccccttacaa ttatagcaag ccagcgccac ctatccaacg
|
||||
aaccactatc acgaaaaaaa ctctatctct ccatattaat ctccctccaa atctccttaa
|
||||
tcataacatt cacagccaca gaactaatca tattctatat cttcttcgaa gccacactta
|
||||
tccctaccct agttatcatc acccgatgag gcaaccaacc cgaacgtcta aacgcgggta
|
||||
catacttcct attctacacc ctagtaggat ccctccccct acttatcgca ttaatccaca
|
||||
ctcacaacac cttaggctca ctaaatattc tattactcac ccttactgcc caagaactac
|
||||
ctaactcctg agccaacaac ttaatatgac tggcatacac aatagccttt atagtgaaaa
|
||||
taccacttta cgggctccac ctatgactcc ctaaggccca tgttgaggcc cccattgctg
|
||||
gctcaatgat gctcgctgca gtactcttaa aattaggtgg ctatggcata atacgcctca
|
||||
tactcattct taacccccta acaaaacaca tagcttatcc tttcctcgcc ctatctttat
|
||||
ggggtataat cataacaagc tccatctcgc tacggcaaac agatttaaaa tcgctcattg
|
||||
catactcctc aattagccac atagcccttg tagtagcagc tatccttatc caaaccccct
|
||||
gaagcttcac cggcgcagtt gttcttataa ttgcccacgg acttacatca tcattattat
|
||||
tctgcctagc aaactcaaac tacgaacgaa cccacagccg catcataatt ctctctcaag
|
||||
gactccaaac cctactccca ctaatagccc tttgatgact tctggcaagc ctcgccaacc
|
||||
tcgccttacc ccccaccatt aacctactag gagagctctc cgtactagta accacattct
|
||||
cctgatcaaa caccaccctt ttacttacag gatctaacat actaattaca gccctgtact
|
||||
ccctttatat atttaccaca acacaatgag gcccactcac acaccacatc accaacataa
|
||||
aaccctcatt tacacgagaa aacatcctca tattcatgca cctatccccc atcctcctcc
|
||||
tatccctcaa ccccgatatt atcaccgggt ttacctcctg taaatatagt ttaaccaaaa
|
||||
catcagattg tgaatctgat aacagaggct cacaacccct tatttaccga gaaagctcgt
|
||||
aagagctgct aactcatacc cccgtgctta acaacatggc tttctcaact tttaaaggat
|
||||
aacagctatc cattggtctt aggacccaaa aattttggtg caactccaaa taaaagtaat
|
||||
aactatgtac gctaccataa ccaccttagc cctaacttcc ttaattcccc ctatccttac
|
||||
caccttcatc aatcctaaca aaaaaagctc atacccccat tacgtaaaat ctatcgtcgc
|
||||
atccaccttt atcatcagcc tcttccccac aacaatattt ctatgcctag accaagaagc
|
||||
tattatctca agctgacact gagcaacaac ccaaacaatt caactctccc taagctttaa
|
||||
actagattat ttctccataa tatttatccc tgtagcactg ttcgtcacat gatccatcat
|
||||
agaattctca ctatgatata taaactcaga ccccaacatc aaccaattct tcaaatacct
|
||||
gctcatcttt ctaatcacca tactaatcct agtcaccgct aataacctgt ttcaactctt
|
||||
tatcggctga gaaggtgtgg gaattatatc ttttctactc attggctgat gatacgctcg
|
||||
aacagacgcc aacacagcag ccgtccaagc aattctatac aaccgtattg gtgacattgg
|
||||
ttttatccta gccctagcat gatttctcct acactccaac tcatgagacc cacaacaaat
|
||||
atctctctta aacaccaacc ctaaccttat cccacttcta ggtttcctcc tagcagcagc
|
||||
aggcaaatca gctcaactag gcctccaccc ctgactcccc tcggccatag aaggccccac
|
||||
ccccgtctca gccctactcc actcaagcac tatagtcgtg gcaggggtct tcctactcat
|
||||
ccgcttccgc catttagcag aaaacaactc actagctcaa actcttacac tatgcctagg
|
||||
cgctattact actctattcg cggcagtctg cgctctcaca caaaatgata tcaaaaaaat
|
||||
cgtagccttc tccacttcaa gccaattagg gctcatagta gccacaattg gcatcggcca
|
||||
gccacaccta gcatttctac acatctgcac ccacgctttc tttaaagcca tattatttat
|
||||
atgctccgga tccattatcc ataacctcaa taatgagcaa gacatccgaa aaataggagg
|
||||
tctgctcaaa gccatacccc ttacttcaac ctccctagcc attggcagcc tagcactaat
|
||||
aggaatacct tttctcacag gcttctactc caaagacctc atcatcgaaa ccgcaaacat
|
||||
atcacacaca aacgcctggg ccctatcaat cattctcatc gccacctctc ttacgagtgc
|
||||
ctacagcact cgaataatcc ttctcaccct gacaggtcaa cctcgcttcc caacctttgc
|
||||
caacatcaac gaaaactact ccaccctatt aaatcctatt aaacgcctaa caattggaag
|
||||
cctgtttgca ggattcttca tcaccaacaa catcctccct acatccgtac cccaaatgac
|
||||
aatcccactt tacttaaaac ttacagctct aagcatcact ctcctaggac tcctgacagc
|
||||
cctagacctc aactacctca ccaacaaact caaaataaaa cacccaccac acacatttta
|
||||
cttctccaac atactcggat tttaccccaa catcacacac cgcacaattc cctatctagg
|
||||
ccttctcata agtcaaaatc tacccctact cctcctagac ctaatttgac tagaaaaact
|
||||
actacccaaa acaatctcac agcatcaaat ctcagcctcc atcactacct ctacccaaaa
|
||||
aggtttgatc aaactgtact tcctctcttt cttcttccct cttcttttaa tccttcttct
|
||||
aatcacataa cctattaccc cgagcaatct caatcacaat atatacacca acaaataacg
|
||||
tccaaccagt aaccactacc aatcaacgcc cataatcata caaagccccc gcaccaatag
|
||||
gatcttcccg aattaaccct gaaccttccc cctcataaat cattcaactc cccacattat
|
||||
taaaattcac cacaaccacc accccatcat actctttcac ccacaacacc agccccacct
|
||||
ccattgctaa ccccactaag acactcacca agacctcaac cccagacccc cacgcctcag
|
||||
gatactcccc aatggccatc gctgtagtat acccaaaaac aaccatcatc ccccctaaat
|
||||
aaattaaaaa aaccattaaa cccatataac ctcccccaca gtttaaaata atagcacacc
|
||||
caaccacacc actaacaatc aacactaaac ccccataaat aggagaaggc ttagaggaaa
|
||||
accccacaaa ccccattact aaacccacac tcaataaaaa taaaacatat gtcatcattc
|
||||
tcgcacggac cacgaccgcg actaatgata tgaaaaacca tcgttgtact tcaactacaa
|
||||
gaacatcaat gacccctata cgcaaaacta acccactagc aaaactaatt aaccactcat
|
||||
tcattgacct ccctaccccg tccaacatct ccacatgatg aaacttcggc tcactccttg
|
||||
gtgcctgctt aatccttcaa atcaccacag ggctattcct agccatacac tactcacctg
|
||||
atgcctcaac cgccttctca tcaattgccc acatcacccg agatgtaaac tatggctgaa
|
||||
ccatccgcta cctccacgct aacggcgcct caatattctt catttgcctc tttctacaca
|
||||
tcggacgggg cctatactac ggctcatttc tccaccaaga aacctgaaac atcggcatca
|
||||
tcctcctact cacaaccata gcagcagcct tcataggcta tgtcctccca tgaggccaaa
|
||||
tatccttctg aggagccaca gtaatcacaa acttgctatc cgccatcccg tacatcggaa
|
||||
cagacctagt ccaatgagtt tgaggtggtt actcagtaga tagccctacc cttacacgat
|
||||
tctttacctt ccactttatc ctacccttca tcatcacagc cctaacaacc ctccatctcc
|
||||
tatttctaca cgaaacagga tcaaacaacc ctctaggcat cccctcccac tctgacaaaa
|
||||
tcaccttcca cccctactac acaatcaaag acatcctagg cctattcctc tttctcctga
|
||||
ccttgataac attaacacta ttctcaccag acctcctagg agacccagac aactacacct
|
||||
tagccaaccc cctaagcacc ccaccccaca tcaaacccga atgatatttc ctatttgcct
|
||||
acgcaattct ccgatctgtc cccaataaac taggaggcgt cttagctcta ttactatcta
|
||||
ttctcatcct agcaataatt cctattctcc acatatccaa acaacaaagc ataatattcc
|
||||
gcccattaag ccaactactc tactgattcc taatcgcaga cctcttcacc ctaacctgaa
|
||||
tcggaggaca accagtaagc taccccttca tcaccattgg gcaagtagca tccgtactat
|
||||
acttcacgac aatcctattc ctgataccaa tcacatccct gatcgaaaac aaaatactca
|
||||
aatgaacctg cccttgtagt acagaccaat acaccagtct tgtaaaccgg aaacgaagac
|
||||
ctccttccaa gggcatattc agagaaaaag tcctcgactc caccatcagc acccaaagct
|
||||
aatattctaa tttaaactat tctctgttct ttcatgggga gacaaatttg ggtactacca
|
||||
gtattagcta acccatcata attatcatgt atgtcgtgca ttactgccag acaccatgaa
|
||||
taatgtacag taccataaaa cgcccaatca cctgtagcac atcccaacgg aataccaact
|
||||
aacccatccc tcacaaaaag tacataacac ataagatcat ttatcgcaca tagcacatcc
|
||||
cagttaaatc accctcgtcc ccacggatgc cccccctcag atgggaatcc cttgaacacc
|
||||
atcctccgtg aaatcaatat cccgcacaag agtgcactct cctcgctccg ggcccataac
|
||||
acttgggggt agctaaagtg aactgtatcc ggcatctggt tcctacttca gggtcataac
|
||||
acctaaagcg cttcacacgt tccccttaaa taagacatca cgatggatca caggtctatc
|
||||
accctattaa ccactcacgg gagctctcca tgcatttggt atttttcgtc ggggggtgtg
|
||||
cacgcgatag tgagacgctg gaaccggagc accacatgtc gcagtatctg tctttgattc
|
||||
ctgccccatg ctaccattta tcgcacctac gttcaatatt acagccgagc gcacagtgtt
|
||||
catggtgtta attaattcat gcttgttgga cataaaacaa ccaggtggac gtgaacacaa
|
||||
ccacccttca caccaaaaac acaacaaaaa tccaaccccc ccccccgcac tagaaaacag
|
||||
ccccaccaaa ctccaaattt catcttttgg cggtatgcac ttttaacagt cacccctcaa
|
||||
ctaacatagt cagcccacca gtacaacccc cgcccgccct agcaacacac actgctgctg
|
||||
atcctatacc ccgaattaac caaaccccaa agacacccca caca
|
||||
18669
DNA_Alignment/DNA_Alignment/GreatApes.txt_vs_protypicalHuman.txt.txt
Normal file
18669
DNA_Alignment/DNA_Alignment/GreatApes.txt_vs_protypicalHuman.txt.txt
Normal file
File diff suppressed because it is too large
Load Diff
177
DNA_Alignment/DNA_Alignment/Program.cs
Normal file
177
DNA_Alignment/DNA_Alignment/Program.cs
Normal file
@@ -0,0 +1,177 @@
|
||||
using System;
|
||||
using System.CodeDom;
|
||||
using System.Collections.Generic;
|
||||
using System.IO;
|
||||
using System.Linq;
|
||||
using System.Text.RegularExpressions;
|
||||
using System.Xml.Schema;
|
||||
|
||||
namespace DNA_Alignment
|
||||
{
|
||||
internal class Program
|
||||
{
|
||||
/// <summary>
|
||||
/// Cost Matrix
|
||||
/// </summary>
|
||||
static readonly int[,] AlignmentMatrix =
|
||||
new int[5, 5] {
|
||||
{5, -1, -2, -1, -3},
|
||||
{-1, 5, -3, -2, -4},
|
||||
{-2, -3, 5, -2, -2},
|
||||
{-1, -2, -2, 5, -1},
|
||||
{-3, -4, -2, -1, 0}
|
||||
};
|
||||
/// <summary>
|
||||
/// Letter LookUP
|
||||
/// </summary>
|
||||
static readonly Dictionary<char, int> LetterLookUp=
|
||||
new Dictionary<char, int>
|
||||
{
|
||||
{'a', 0},
|
||||
{'c', 1},
|
||||
{'g', 2},
|
||||
{'t', 3},
|
||||
{'-', 4}
|
||||
};
|
||||
|
||||
/// <summary>
|
||||
/// Calculates the chage score given two chars.
|
||||
/// </summary>
|
||||
/// <param name="i"></param>
|
||||
/// <param name="j"></param>
|
||||
/// <returns></returns>
|
||||
private static int score(char i, char j)
|
||||
{
|
||||
return AlignmentMatrix[LetterLookUp[i], LetterLookUp[j]];
|
||||
}
|
||||
/// <summary>
|
||||
/// takes a string and reverses it.
|
||||
/// </summary>
|
||||
/// <param name="s"></param>
|
||||
/// <returns></returns>
|
||||
private static string ReverseString(string s)
|
||||
{
|
||||
char[] arr = s.ToCharArray();
|
||||
Array.Reverse(arr);
|
||||
return new string(arr);
|
||||
}
|
||||
|
||||
/// <summary>
|
||||
/// Takes M and reverses the process.
|
||||
/// </summary>
|
||||
/// <param name="M"></param>
|
||||
/// <param name="writeFile"></param>
|
||||
/// <param name="score"></param>
|
||||
/// <returns></returns>
|
||||
private static Tuple<string, string> Traceback(int[,] M, string writeFile, string score)
|
||||
{
|
||||
var xAlign = "";
|
||||
var yAlign = "";
|
||||
var i = A.Length;
|
||||
var j = B.Length;
|
||||
var r = new List<string>();
|
||||
r.Add(score);
|
||||
|
||||
while (i > 0 || j > 0)
|
||||
{
|
||||
var up = M[i - 1, j];
|
||||
var left = M[i, j - 1];
|
||||
var diag = M[i - 1, j - 1];
|
||||
if (i > 0 && up == Math.Max(Math.Max(up, left), diag))//up
|
||||
{
|
||||
r.Add($"{A[i - 1]} => -");
|
||||
// Console.WriteLine(A[j - 1]+" => -");
|
||||
|
||||
xAlign += A[i - 1];
|
||||
yAlign += '-';
|
||||
i -= 1;
|
||||
}
|
||||
else if (j > 0 && left == Math.Max(Math.Max(up, left), diag))//left
|
||||
{
|
||||
r.Add($"- => {B[j - 1]}");
|
||||
// Console.WriteLine("- => "+B[i - 1]);
|
||||
|
||||
xAlign += '-';
|
||||
yAlign += B[j - 1];
|
||||
j -= 1;
|
||||
}else//diag
|
||||
{
|
||||
r.Add($"{A[i - 1]} = {B[j - 1]}");
|
||||
// Console.WriteLine(A[j - 1]+" = "+B[i - 1]);
|
||||
xAlign += A[i - 1];
|
||||
yAlign += B[j - 1];
|
||||
i -= 1;
|
||||
j -= 1;
|
||||
}
|
||||
}
|
||||
File.WriteAllLines(writeFile, r);
|
||||
//reverse the strings
|
||||
xAlign = ReverseString(xAlign);
|
||||
yAlign = ReverseString(yAlign);
|
||||
return new Tuple<string, string>(xAlign, yAlign);
|
||||
}
|
||||
|
||||
/// <summary>
|
||||
/// Creates the array M
|
||||
/// </summary>
|
||||
/// <returns></returns>
|
||||
private static int[,] DPmed()
|
||||
{
|
||||
var m = A.Length+1;
|
||||
var n = B.Length+1;
|
||||
var M = new int [m, n];
|
||||
|
||||
for (var x = 1; x < m; x++)
|
||||
{
|
||||
M[x, 0] = M[x-1, 0] + AlignmentMatrix[LetterLookUp[A[x-1]], LetterLookUp['-']];
|
||||
}
|
||||
|
||||
for (var y = 1; y < n; y++)
|
||||
{
|
||||
M[0, y] = M[0, y-1] + AlignmentMatrix[LetterLookUp['-'], LetterLookUp[B[y-1]]];
|
||||
}
|
||||
|
||||
for (var x = 1; x < m; x++)
|
||||
{
|
||||
for (var y = 1; y < n; y++)
|
||||
{
|
||||
//sets up the cache
|
||||
M[x, y] = Math.Max(Math.Max(M[x-1, y-1] + score(A[x - 1], B[y - 1]),
|
||||
M[x-1, y] + score(A[x-1], '-')),
|
||||
M[x, y-1] + score('-', B[y-1]));
|
||||
}
|
||||
}
|
||||
|
||||
return M;
|
||||
}
|
||||
|
||||
|
||||
|
||||
|
||||
public static void Main(string[] args)
|
||||
{
|
||||
// Debug mode from ../DNA_Alignment/bin/Debug/
|
||||
// Release mode from ../DNA_Alignment/bin/Release/
|
||||
var f1 = File.ReadAllText(Path.Combine(Environment.CurrentDirectory, args[0]));
|
||||
var f2 = File.ReadAllText(Path.Combine(Environment.CurrentDirectory, args[1]));
|
||||
A = Regex.Replace(f1, @"(\r\n|\r|\n)|n|[ ]|[1234567890]", "");
|
||||
B = Regex.Replace(f2, @"(\r\n|\r|\n)|n|[ ]", "");
|
||||
var M = DPmed();
|
||||
var writeFile = Path.Combine(Environment.CurrentDirectory, $"{args[0]}_vs_{args[1]}.txt");
|
||||
Console.WriteLine("Score: " + M[A.Length,B.Length]);
|
||||
var results = Traceback(M, writeFile, $"Score: {M[A.Length,B.Length].ToString()}");
|
||||
|
||||
|
||||
}
|
||||
|
||||
/// <summary>
|
||||
/// String 1
|
||||
/// </summary>
|
||||
public static string A { get; set; }
|
||||
|
||||
/// <summary>
|
||||
/// String 2
|
||||
/// </summary>
|
||||
public static string B { get; set; }
|
||||
}
|
||||
}
|
||||
35
DNA_Alignment/DNA_Alignment/Properties/AssemblyInfo.cs
Normal file
35
DNA_Alignment/DNA_Alignment/Properties/AssemblyInfo.cs
Normal file
@@ -0,0 +1,35 @@
|
||||
using System.Reflection;
|
||||
using System.Runtime.InteropServices;
|
||||
|
||||
// General Information about an assembly is controlled through the following
|
||||
// set of attributes. Change these attribute values to modify the information
|
||||
// associated with an assembly.
|
||||
[assembly: AssemblyTitle("DNA_Alignment")]
|
||||
[assembly: AssemblyDescription("")]
|
||||
[assembly: AssemblyConfiguration("")]
|
||||
[assembly: AssemblyCompany("")]
|
||||
[assembly: AssemblyProduct("DNA_Alignment")]
|
||||
[assembly: AssemblyCopyright("Copyright © 2020")]
|
||||
[assembly: AssemblyTrademark("")]
|
||||
[assembly: AssemblyCulture("")]
|
||||
|
||||
// Setting ComVisible to false makes the types in this assembly not visible
|
||||
// to COM components. If you need to access a type in this assembly from
|
||||
// COM, set the ComVisible attribute to true on that type.
|
||||
[assembly: ComVisible(false)]
|
||||
|
||||
// The following GUID is for the ID of the typelib if this project is exposed to COM
|
||||
[assembly: Guid("ED9116C6-3BCE-4B84-89EA-DEE30AE5FBC5")]
|
||||
|
||||
// Version information for an assembly consists of the following four values:
|
||||
//
|
||||
// Major Version
|
||||
// Minor Version
|
||||
// Build Number
|
||||
// Revision
|
||||
//
|
||||
// You can specify all the values or you can default the Build and Revision Numbers
|
||||
// by using the '*' as shown below:
|
||||
// [assembly: AssemblyVersion("1.0.*")]
|
||||
[assembly: AssemblyVersion("1.0.0.0")]
|
||||
[assembly: AssemblyFileVersion("1.0.0.0")]
|
||||
BIN
DNA_Alignment/DNA_Alignment/bin/Debug/DNA_Alignment.exe
Normal file
BIN
DNA_Alignment/DNA_Alignment/bin/Debug/DNA_Alignment.exe
Normal file
Binary file not shown.
BIN
DNA_Alignment/DNA_Alignment/bin/Debug/DNA_Alignment.pdb
Normal file
BIN
DNA_Alignment/DNA_Alignment/bin/Debug/DNA_Alignment.pdb
Normal file
Binary file not shown.
@@ -0,0 +1,273 @@
|
||||
gtttatgtag cttacctccc caaagcaata cactgaaaat gtttcgacgg gctcacatca
|
||||
ccccataaac aaataggttt ggtcctagcc tttctattaa ctcttagtag gattacacat
|
||||
gcaagcatcc ccgccccagt gaatcaccct ctaaatcacc acgatcaaaa ggaacaagca
|
||||
tcaagtacgc agaaatgcag ctcaaaacgc ttagcctagc cacaccccca cgggggacag
|
||||
cagtgattaa cctttagcaa taaacgaaag tttaactaag ccatactaac cccagggttg
|
||||
gtcaatttcg tgccagccac cgcggtcaca cgattaaccc aagccaatag aaatcggcgt
|
||||
aaagagtgtt ttagatcaat ccccaataaa gctaaaattc acctgagttg taaaaaactc
|
||||
cagctgatat aaaataaact acgaaagtgg ctttaatata tctgaacaca caatagctag
|
||||
gacccaaact gggattagat accccactat gcctagccct aaacttcaac agttaaatta
|
||||
acaagactgc tcgccagaac actacgagcc acagcttaaa actcaaagga cctggcggtg
|
||||
cttcatatcc ctctagagga gcctgttctg taatcgataa accccgatca acctcaccac
|
||||
ctcttgctca gcctatatac cgccatcttc agcaaaccct gatgaaggcc acaaagtaag
|
||||
cacaagtacc cacgtaaaga cgttaggtca aggtgtagcc catgaggtgg caagaaatgg
|
||||
gctacatttt ctacttcaga aaactacgat aacccttatg aaacctaagg gtagaaggtg
|
||||
gatttagcag taaactaaga gtagagtgct tagttgaaca gggccctgaa gcgcgtacac
|
||||
accgcccgtc accctcctca agtatacttc aaaggacatt taactaaaac ccctacgcat
|
||||
ctatatagag gagataagtc gtaacatggt aagtgtactg gaaagtgcac ttggacgaac
|
||||
cagagtgtag cttaacacaa agcacccaac ttacacttag gagatttcaa ctcaacttga
|
||||
ccgctctgag caaaacctag ccccaaaccc accccacatt actaccaaac aactttaatc
|
||||
aaaccattta cccaaataaa gtataggcga tagaaattgt aaatcggcgc aatagatata
|
||||
gtaccgcaag ggaaagatga aaaaatataa ccaagcacga cacagcaagg actaacccct
|
||||
gtaccttctg cataatgaat taactagaaa taactttgca aagagaaccg aagctaagac
|
||||
ccccgaaacc agacgagcta cctaagaaca gctaaaagag cacacccgtc tatgtagcaa
|
||||
aatagtggga agattcctag gtagaggcga caaacctacc gagcctggtg atagctggtt
|
||||
gtccaagaca gaatcttagt tcaactttaa atttacccac agaaccctcc aaatcctccc
|
||||
gtaaatttaa ctgttagtcc aaagaggaac agctctttgg acactaggaa aaaaccttgt
|
||||
aaagtgagta aaaaatttaa tacccatagt aggcctaaaa gcagccacca attaagaaag
|
||||
cgttcaagct caacactatc acccaaaata atcccaaaca cacaactgaa ctccctacac
|
||||
ccaattggac caatctatta ccctatagaa gagctaatgt tagtataagt aacatgaaac
|
||||
cattctcctc cgcataagcc tacatcagac caaaatatta aactgacaat taacaactca
|
||||
atatctacaa ctaaccaaca agctattatt acccccactg ttaacccaac acaggcatgc
|
||||
ccacgaggaa aggttgaaaa aagtaaaagg aactcggcaa attttacccc gcctgtttac
|
||||
caaaaacatc acctctagca ttaccagtat tagaggcacc gcctgcccag tgacatgcgt
|
||||
tcaacggccg cggtacccta accgtgcaaa ggtagcataa tcacttgttc cttaaatagg
|
||||
gactcgtatg aatggctcca cgagggttca gctgtctctt acttttgacc agtgaaattg
|
||||
acctgcccgt gaagaggcgg acataacata acaagacgag aagaccctat ggagctttaa
|
||||
ttcattaatg caagcaacac ttaataaacc cacaggtcct aaactaccaa acctgcatta
|
||||
aaaatttcgg ttggggcgac ctcggagtat aatctaacct ccgaacaaca catgccaaga
|
||||
cttcaccagt caaagcgagc taccacattt aattgatcca atgacttgac caacggaaca
|
||||
agttacccta gggataacag cgcaatccta ttctagagtc catatcaaca gtagggttta
|
||||
cgacctcgat gttggatcag gacatcccga tggtgcagcc gctatcaaag gttcgtttgt
|
||||
tcaacgatta aagtcctacg tgatctgagt tcagaccgga gtaatccagg tcggtttcta
|
||||
tctattccgt gtttctccct gtacgaaagg acaagagaaa cgaggcctac ttcacaaagc
|
||||
gcctcccccc gtaaatgata ctatctcaat ttaatatagc gcccacatct actcaagaat
|
||||
agggtttgtt aagatggcag agcccggtaa tcgcataaaa cttaaaactt tatagtcaga
|
||||
ggttcaattc ctcttcttaa caatatatcc atggctaacc ttctactcct cattgtacct
|
||||
atcctaatcg ccatagcatt cctaatgcta accgaacgaa aaattttagg ctatatacaa
|
||||
ctacgtaaag gccccaacgt cgtaggcccc tacgggctac tacaaccctt cgctgacgcc
|
||||
ataaaactct tcaccaaaga gcccctaaaa ccctcaacat caaccatcac cctctacatc
|
||||
accgccccaa ccttagctct cactattgcc ctactattat gaacccccct ccccataccc
|
||||
aaccccctag tcaatctcaa tctaggcctc ctattcatcc tagccacctc tagcctagcc
|
||||
gtttactcca tcctctgatc agggtgggca tcaaactcaa actacgcctt gatcggcgca
|
||||
ctacgagcag tagcccaaac aatctcatat gaagtcaccc tggccattat cctactatca
|
||||
acactactga tgaatggttc ctttaacctc tccaccctca tcataacaca agaacacctc
|
||||
tgactgctcc taccaacatg acccttagct ataatatgat ttatctccac attagcagaa
|
||||
accaaccgga cccccttcga cctcgctgaa ggagaatctg aactagtctc aggctttaat
|
||||
atcgaatatg ccgcaggccc cctcgcccta tttttcatag ccgagtacat aaatattatc
|
||||
ataataaata ctctcaccac tataattttc ctaggaacaa catacaatgc ccactcccct
|
||||
gaactctaca cagtatgctt catcaccaaa accctgcttc taacctctct attcctatga
|
||||
attcgaactg catatcctcg atttcgctac gaccaactca tgcacctcct gtgaaaaaac
|
||||
ttcttgccac tcaccctggc actactcata tgatatattt ccatacctac cacaatctcc
|
||||
agcattcccc ctcaaaccta agaaatatgt ctgataaaag agttactttg atagagtaaa
|
||||
taatagaggt ttaaaccccc ttatttctag gactatgaga attgaaccca tccctgagaa
|
||||
tccaaaattc tccgtgccac ctgtcacacc ccatcctaaa gtaaggtcag ctaaataagc
|
||||
tatcgggccc ataccccgaa aatgttggtc acatccttcc cgtactaatt aaccccctgg
|
||||
cccaacccat catctactct accatcttcg caggcactct tattacagca ctaagctccc
|
||||
actgattttt tgcctgagta ggcctagaaa taaacatact agcttttatc ccagtcctaa
|
||||
ccaaaaaaat aaatccccgc tccacagaag ccgccatcaa atatttcctc acacaagcaa
|
||||
ctgcatccat aatcctccta atagccatcc tctccaacaa catactctcc ggacaatgaa
|
||||
ccacaaccaa tgccactaat caatactcat cattaatgat cgtagtagct atagctataa
|
||||
aactaggaat agcccccttt cacttctgag tgccagaagt cacccaaggc acccccctaa
|
||||
tgtctggcct actcctcctc acatgacaaa aactagcccc tatgtcaatc atataccaaa
|
||||
tttcctcgtc aacaaatgta agccttctcc tcactctttc aatcctatcc atcctagcag
|
||||
gcagctgagg cggactaaac caaactcaac tacgcaagat tctagcatac tcctcaatca
|
||||
cccatgtagg atgaataata gcagttctac catataaccc taatataact attcttaatc
|
||||
tgaccattta tattatcctc actactacca cattcctatt actcaaccta agctccagca
|
||||
ccacaacctt actactatct cgtacttgaa ataaactgac atgattaaca cctctaatcc
|
||||
cctccaccct cctctcccta ggaggtctac ccccactaac cggcttccta cccaaatggc
|
||||
ttattatcga agaattcaca aaaaataacg acctcattac ccccaccatt atggccatca
|
||||
tcaccctcct caacctctat ttctatctac gcctaattta ctccacctct atcacactac
|
||||
tacccatatc caacaacgta aagataaaat gacagctcga atatactaaa cccactccct
|
||||
tcctccctac acttatcaca ctcaccaccc tacttctacc catctccccc ttcatactaa
|
||||
tagttctata gaaatttagg ttaaacatag accaagagcc ttcaaagccc ttagtaagtt
|
||||
acaacactta atttctgcaa caactaagga ctgcaaaacc ctactctgca tcaactgaac
|
||||
gcaaatcagc cactttaatt aagctaagcc cttactagat caatgggact caaacccaca
|
||||
aacatttagt taacagctaa acaccctagt caactggctt caatctactt ctcccgccgc
|
||||
aagaaaaaaa ggcgggagaa gccccggcag gtttgaagct gcttcttcga atttgcaatt
|
||||
caatatgaaa ttcacctcgg agctggtaaa aagaggccca gcctctgtct ttagatttac
|
||||
agtccaatgc cttactcagc cattttacct ccttttttcc actgatgttc accgaccgct
|
||||
gattattctc tacaaaccat aaagatattg gaacactata tctactattc ggcgcatgag
|
||||
ctggagtcct aggcacagcc ctaagtctcc ttattcgagc agaacttggt caaccaggca
|
||||
accttctagg taacgatcac atctataatg ttatcgtcac agcccatgcg ttcgtaataa
|
||||
ttttcttcat agtaatgcct atcataatcg gaggctttgg caactggcta gtacccttaa
|
||||
taattggtgc ccccgacatg gcattccccc gcataaacaa cataagcttc tgactccttc
|
||||
ccccttcttt cctacttctg ctcgcatccg ctatagtaga agccggcgca gggactggtt
|
||||
ggacagtcta ccctccctta gcaggaaatt attcccaccc cggagcttct gtagacctaa
|
||||
ccattttttc cctacaccta gcaggcatct cctctattct aggggccatc aacttcatta
|
||||
caacaatcat caatataaaa ccccccgcca taacccaata ccaaacaccc cttttcgtct
|
||||
gatccgtcct aatcacagca gtcttacttc ttctatctct cccagtacta gctgctggaa
|
||||
ttaccatatt attaacagac cgtaacctca acaccacctt tttcgaccca gccggaggag
|
||||
gagatcctat cctataccaa cacttattct gattttttgg acaccccgaa gtttacattc
|
||||
taatcctacc aggcttcgga ataatctccc acattgtaac ttattactcc ggaaaaaaag
|
||||
aaccattcgg atatataggt atagtctgag ctataatatc aattggtttc ctgggattta
|
||||
ttgtgtgagc ccaccacata tttacagtag gaatagacgt agatacacga gcctacttca
|
||||
cctccgctac cataatcatc gctatcccca ccggcgtcaa agtattcagc tgactcgcta
|
||||
cactccatgg aagtaatacc aaatgatctg ccgcaatgct ctgagcccta gggttcattt
|
||||
ttctcttcac tgtaggcggc ctaaccggca tcgtactagc aaactcgtca ttagatatcg
|
||||
tgctgcacga cacatattac gtcgtagctc acttccacta tgtcctatct ataggagctg
|
||||
tgttcgccat catagggggc tttattcact gatttcccct attctcaggc tacactctag
|
||||
atcaaaccta cgccaaaatc cactttgcca tcatattcat tggcgttaat ctaaccttct
|
||||
tcccacaaca ctttcttggc ctatctggaa taccccgaca ttactcggac taccccgatg
|
||||
catatactac atgaaatatc ctgtcatccg tgggctcatt catttcccta acagcagtaa
|
||||
tattaataat ttttataatc tgagaagcct tcgcctcaaa acgaaaagtc ctaataatcg
|
||||
aagaaccctc cacaaatctg gagtgactgt atggatgccc tccaccctat catacatttg
|
||||
aagagtctgt atatataaag tctaaacaaa aaaggaagga atcgaacccc ccaaagctgg
|
||||
tttcaagcca accccatgac cttcatgact ttttcaaaaa gatattagaa aaactatttc
|
||||
ataactttgt caaggttaaa ttacgggtta aaccccgtat atcttaatgg cacatgcagc
|
||||
gcaagtaggt ctacaagacg ctacttctcc tatcatagaa gaactaatca tctttcatga
|
||||
tcatgccctc ataatcattt ttctcatctg cttcttagtc ctgtacgccc ttttcctaac
|
||||
actcacaaca aagctaacta acaacaacat ctcagacgcc caagaaatag agaccatctg
|
||||
aaccatcctg cccgctatta tcttagtcct gatcgccctc ccatctctac gaatcctcta
|
||||
tatgacagat gaaatcaatg acccctcctt cactatcaaa tcaatcggtc accaatgata
|
||||
ctgaacctac gaatacaccg actatggtgg attgatcttt aactcctata tactcccccc
|
||||
attattccta gaaccaggtg acctacgact ccttgacgtc gacaaccgag tagtccttcc
|
||||
agttgaagcc cccgtccgta taataattac atcccaagat gtcttacact catgagctgt
|
||||
tcccacatta ggcctaaaaa cagacgcaat ccccgggcgc ctgaaccaaa ccacattcac
|
||||
cgccacacga ccaggagtat actacggcca gtgctcagaa atctgtggag ccaaccacag
|
||||
ttttatgccc attgttctag agctaatccc cctaaaaatc tttgaaatag gacccgtatt
|
||||
cgccctataa tacccctctc atccctctcc agagctcact gtaaagctaa cctagcgtta
|
||||
accttttaag ttaaagatta agagtatcgg cacctctttg cagtgaaatg ccccagctaa
|
||||
ataccaccgt atggcccacc ataattgccc caatactcct cacactattt ctcattaccc
|
||||
aactaaaagt tttaaacaca aattaccacc tacccccctt accaaaaact ataaaaataa
|
||||
aaaacttctg taaaccctga gaaccaaaat gaacgaaaat ttattcgctt cattcattgc
|
||||
ccccacaatc ctaggcttac ccgccgcagt attaattatc ctacttcccc ctctactgat
|
||||
ccccacctcc aaatatctca tcaacaaccg actgattgcc acccaacagt gactaatcca
|
||||
actaacctca aaacaaataa taactataca taacgccaag ggacgaacct gatcccttat
|
||||
gttaatatga ttaattattt ttattgccac aaccaacctc ctcggactct tgccccactc
|
||||
attcacacca actacccagc tatctataaa cctggccata gccatccccc tgtgagcagg
|
||||
cgcagtaact acaggctttc gctccaagac taaaaatgcc ctagcccacc tactaccaca
|
||||
aggcacccct acacccctta tccctatact agtcatcatt gaaaccatca gcctattcat
|
||||
ccaaccaata gccctagctg tacgcctaac cgctaacatc actgcaggtc acctacttat
|
||||
gcacctaatc ggaagcgcca cactagcaat atcaactacc aatcttccct caacactcat
|
||||
tatctttaca gtcctaattt tattaactat actagaaatc gctgtcgccc tcatccaagc
|
||||
ctacgttttc acacttttag tgagcctcta cctgcacgag aacacataat gatccaccaa
|
||||
tcacatgcct atcacatagt aaaacccagc ccatgacccc taacaggggc cctctcagcc
|
||||
ctcctaataa cctcaggctt agccatatga ttccacttcc actctacaac cctactcata
|
||||
ctaggcctac taaccaacat actaactata taccaatgat gacgtgatgt aatgcgagaa
|
||||
agcacgtacc aaggccacca tacactaccc gtccaaaaag gcttacgata tggaatgatc
|
||||
ctatttatta cctcagaagt ctttttcttc gcaggattct tctgagcttt ctaccactcc
|
||||
agcctagccc ctacccctca actaggagca cactgacccc caacaggcat caccccacta
|
||||
aaccccctag aagttccact tttaaataca tctgtactgc tcgcatcagg tgtctcaatt
|
||||
acctgagccc accatagcct aatagaaaat aaccgtaacc aaataattca agcactactt
|
||||
atcacaattt tactgggcct ctacttcacc ctcctacaag cctcagagta ctttgaagcc
|
||||
ccctttacca tttccgatgg tatctatggc tcaacatttt ttgtagccac aggctttcac
|
||||
gggctccacg tcatcattgg gtcaactttc ctcactatct gtcttattcg ccaactaata
|
||||
tttcacttta catccaaaca ccacttcggc ttcgaagccg ccgcttggta ttggcacttc
|
||||
gtagatgtag tctgactatt cctatacgtc tccatctact gatgagggtc ctactctttt
|
||||
agtataatta gtaccgttaa cttccaatta accagttttg gtagtaccca aaaaagagta
|
||||
ataaacttcg ccctgatctt aataaccaac acccttctag ccctactact aataattatt
|
||||
acattttgac taccgcaact taacagctac atagaaaaaa ctaaccccta cgaatgtggt
|
||||
ttcgaccccg tatcccccgc ccgcattcct ttctccataa aatttttcct agtagccatc
|
||||
actttcttac tatttgacct agaaattgcc ctcctattgc ccctgccatg agccctacaa
|
||||
acaaccaact taccactaat agtcatgtca tccctcttat taatcattat cctaacccta
|
||||
agtctagcct acgaatgact gcaaaaagga ctagactgga ccgaattggt acatagttta
|
||||
aacaaaacga atgatttcga ctcattaaat tatgataatc atatttacca aatgcccctt
|
||||
atttacataa acattatact agcatttacc atctcacttc taggaatact agtgtaccgt
|
||||
tcacacctaa tatcctccct actatgccta gaaggaataa tattatcact attcattata
|
||||
gctactctca taaccctcaa tacccacttc ctcttagcta acattgtacc catcaccata
|
||||
ctagtctttg ctgcctgtga agcagcagta ggcctagccc tactagtctc aatctctaac
|
||||
acatatggtc ttgactatgt acaaaaccta aacctgctcc aatgctaaaa ctaatcgccc
|
||||
caacaattat actactaccg ctaacatgac tctccaaaaa acatataatt tgaatcaaca
|
||||
caaccaccca cagcctaatc atcagcatca ttcccctact attttttaac caaattaata
|
||||
acaatctatt tagttactcc ctatcttttt cctccgaccc cctaacgacc cccctcctaa
|
||||
tattaactac ctgactccta ccccttacaa ttatagcaag ccagcgccac ctatccaacg
|
||||
aaccactatc acgaaaaaaa ctctatctct ccatattaat ctccctccaa atctccttaa
|
||||
tcataacatt cacagccaca gaactaatca tattctatat cttcttcgaa gccacactta
|
||||
tccctaccct agttatcatc acccgatgag gcaaccaacc cgaacgtcta aacgcgggta
|
||||
catacttcct attctacacc ctagtaggat ccctccccct acttatcgca ttaatccaca
|
||||
ctcacaacac cttaggctca ctaaatattc tattactcac ccttactgcc caagaactac
|
||||
ctaactcctg agccaacaac ttaatatgac tggcatacac aatagccttt atagtgaaaa
|
||||
taccacttta cgggctccac ctatgactcc ctaaggccca tgttgaggcc cccattgctg
|
||||
gctcaatgat gctcgctgca gtactcttaa aattaggtgg ctatggcata atacgcctca
|
||||
tactcattct taacccccta acaaaacaca tagcttatcc tttcctcgcc ctatctttat
|
||||
ggggtataat cataacaagc tccatctcgc tacggcaaac agatttaaaa tcgctcattg
|
||||
catactcctc aattagccac atagcccttg tagtagcagc tatccttatc caaaccccct
|
||||
gaagcttcac cggcgcagtt gttcttataa ttgcccacgg acttacatca tcattattat
|
||||
tctgcctagc aaactcaaac tacgaacgaa cccacagccg catcataatt ctctctcaag
|
||||
gactccaaac cctactccca ctaatagccc tttgatgact tctggcaagc ctcgccaacc
|
||||
tcgccttacc ccccaccatt aacctactag gagagctctc cgtactagta accacattct
|
||||
cctgatcaaa caccaccctt ttacttacag gatctaacat actaattaca gccctgtact
|
||||
ccctttatat atttaccaca acacaatgag gcccactcac acaccacatc accaacataa
|
||||
aaccctcatt tacacgagaa aacatcctca tattcatgca cctatccccc atcctcctcc
|
||||
tatccctcaa ccccgatatt atcaccgggt ttacctcctg taaatatagt ttaaccaaaa
|
||||
catcagattg tgaatctgat aacagaggct cacaacccct tatttaccga gaaagctcgt
|
||||
aagagctgct aactcatacc cccgtgctta acaacatggc tttctcaact tttaaaggat
|
||||
aacagctatc cattggtctt aggacccaaa aattttggtg caactccaaa taaaagtaat
|
||||
aactatgtac gctaccataa ccaccttagc cctaacttcc ttaattcccc ctatccttac
|
||||
caccttcatc aatcctaaca aaaaaagctc atacccccat tacgtaaaat ctatcgtcgc
|
||||
atccaccttt atcatcagcc tcttccccac aacaatattt ctatgcctag accaagaagc
|
||||
tattatctca agctgacact gagcaacaac ccaaacaatt caactctccc taagctttaa
|
||||
actagattat ttctccataa tatttatccc tgtagcactg ttcgtcacat gatccatcat
|
||||
agaattctca ctatgatata taaactcaga ccccaacatc aaccaattct tcaaatacct
|
||||
gctcatcttt ctaatcacca tactaatcct agtcaccgct aataacctgt ttcaactctt
|
||||
tatcggctga gaaggtgtgg gaattatatc ttttctactc attggctgat gatacgctcg
|
||||
aacagacgcc aacacagcag ccgtccaagc aattctatac aaccgtattg gtgacattgg
|
||||
ttttatccta gccctagcat gatttctcct acactccaac tcatgagacc cacaacaaat
|
||||
atctctctta aacaccaacc ctaaccttat cccacttcta ggtttcctcc tagcagcagc
|
||||
aggcaaatca gctcaactag gcctccaccc ctgactcccc tcggccatag aaggccccac
|
||||
ccccgtctca gccctactcc actcaagcac tatagtcgtg gcaggggtct tcctactcat
|
||||
ccgcttccgc catttagcag aaaacaactc actagctcaa actcttacac tatgcctagg
|
||||
cgctattact actctattcg cggcagtctg cgctctcaca caaaatgata tcaaaaaaat
|
||||
cgtagccttc tccacttcaa gccaattagg gctcatagta gccacaattg gcatcggcca
|
||||
gccacaccta gcatttctac acatctgcac ccacgctttc tttaaagcca tattatttat
|
||||
atgctccgga tccattatcc ataacctcaa taatgagcaa gacatccgaa aaataggagg
|
||||
tctgctcaaa gccatacccc ttacttcaac ctccctagcc attggcagcc tagcactaat
|
||||
aggaatacct tttctcacag gcttctactc caaagacctc atcatcgaaa ccgcaaacat
|
||||
atcacacaca aacgcctggg ccctatcaat cattctcatc gccacctctc ttacgagtgc
|
||||
ctacagcact cgaataatcc ttctcaccct gacaggtcaa cctcgcttcc caacctttgc
|
||||
caacatcaac gaaaactact ccaccctatt aaatcctatt aaacgcctaa caattggaag
|
||||
cctgtttgca ggattcttca tcaccaacaa catcctccct acatccgtac cccaaatgac
|
||||
aatcccactt tacttaaaac ttacagctct aagcatcact ctcctaggac tcctgacagc
|
||||
cctagacctc aactacctca ccaacaaact caaaataaaa cacccaccac acacatttta
|
||||
cttctccaac atactcggat tttaccccaa catcacacac cgcacaattc cctatctagg
|
||||
ccttctcata agtcaaaatc tacccctact cctcctagac ctaatttgac tagaaaaact
|
||||
actacccaaa acaatctcac agcatcaaat ctcagcctcc atcactacct ctacccaaaa
|
||||
aggtttgatc aaactgtact tcctctcttt cttcttccct cttcttttaa tccttcttct
|
||||
aatcacataa cctattaccc cgagcaatct caatcacaat atatacacca acaaataacg
|
||||
tccaaccagt aaccactacc aatcaacgcc cataatcata caaagccccc gcaccaatag
|
||||
gatcttcccg aattaaccct gaaccttccc cctcataaat cattcaactc cccacattat
|
||||
taaaattcac cacaaccacc accccatcat actctttcac ccacaacacc agccccacct
|
||||
ccattgctaa ccccactaag acactcacca agacctcaac cccagacccc cacgcctcag
|
||||
gatactcccc aatggccatc gctgtagtat acccaaaaac aaccatcatc ccccctaaat
|
||||
aaattaaaaa aaccattaaa cccatataac ctcccccaca gtttaaaata atagcacacc
|
||||
caaccacacc actaacaatc aacactaaac ccccataaat aggagaaggc ttagaggaaa
|
||||
accccacaaa ccccattact aaacccacac tcaataaaaa taaaacatat gtcatcattc
|
||||
tcgcacggac cacgaccgcg actaatgata tgaaaaacca tcgttgtact tcaactacaa
|
||||
gaacatcaat gacccctata cgcaaaacta acccactagc aaaactaatt aaccactcat
|
||||
tcattgacct ccctaccccg tccaacatct ccacatgatg aaacttcggc tcactccttg
|
||||
gtgcctgctt aatccttcaa atcaccacag ggctattcct agccatacac tactcacctg
|
||||
atgcctcaac cgccttctca tcaattgccc acatcacccg agatgtaaac tatggctgaa
|
||||
ccatccgcta cctccacgct aacggcgcct caatattctt catttgcctc tttctacaca
|
||||
tcggacgggg cctatactac ggctcatttc tccaccaaga aacctgaaac atcggcatca
|
||||
tcctcctact cacaaccata gcagcagcct tcataggcta tgtcctccca tgaggccaaa
|
||||
tatccttctg aggagccaca gtaatcacaa acttgctatc cgccatcccg tacatcggaa
|
||||
cagacctagt ccaatgagtt tgaggtggtt actcagtaga tagccctacc cttacacgat
|
||||
tctttacctt ccactttatc ctacccttca tcatcacagc cctaacaacc ctccatctcc
|
||||
tatttctaca cgaaacagga tcaaacaacc ctctaggcat cccctcccac tctgacaaaa
|
||||
tcaccttcca cccctactac acaatcaaag acatcctagg cctattcctc tttctcctga
|
||||
ccttgataac attaacacta ttctcaccag acctcctagg agacccagac aactacacct
|
||||
tagccaaccc cctaagcacc ccaccccaca tcaaacccga atgatatttc ctatttgcct
|
||||
acgcaattct ccgatctgtc cccaataaac taggaggcgt cttagctcta ttactatcta
|
||||
ttctcatcct agcaataatt cctattctcc acatatccaa acaacaaagc ataatattcc
|
||||
gcccattaag ccaactactc tactgattcc taatcgcaga cctcttcacc ctaacctgaa
|
||||
tcggaggaca accagtaagc taccccttca tcaccattgg gcaagtagca tccgtactat
|
||||
acttcacgac aatcctattc ctgataccaa tcacatccct gatcgaaaac aaaatactca
|
||||
aatgaacctg cccttgtagt acagaccaat acaccagtct tgtaaaccgg aaacgaagac
|
||||
ctccttccaa gggcatattc agagaaaaag tcctcgactc caccatcagc acccaaagct
|
||||
aatattctaa tttaaactat tctctgttct ttcatgggga gacaaatttg ggtactacca
|
||||
gtattagcta acccatcata attatcatgt atgtcgtgca ttactgccag acaccatgaa
|
||||
taatgtacag taccataaaa cgcccaatca cctgtagcac atcccaacgg aataccaact
|
||||
aacccatccc tcacaaaaag tacataacac ataagatcat ttatcgcaca tagcacatcc
|
||||
cagttaaatc accctcgtcc ccacggatgc cccccctcag atgggaatcc cttgaacacc
|
||||
atcctccgtg aaatcaatat cccgcacaag agtgcactct cctcgctccg ggcccataac
|
||||
acttgggggt agctaaagtg aactgtatcc ggcatctggt tcctacttca gggtcataac
|
||||
acctaaagcg cttcacacgt tccccttaaa taagacatca cgatggatca caggtctatc
|
||||
accctattaa ccactcacgg gagctctcca tgcatttggt atttttcgtc ggggggtgtg
|
||||
cacgcgatag tgagacgctg gaaccggagc accacatgtc gcagtatctg tctttgattc
|
||||
ctgccccatg ctaccattta tcgcacctac gttcaatatt acagccgagc gcacagtgtt
|
||||
catggtgtta attaattcat gcttgttgga cataaaacaa ccaggtggac gtgaacacaa
|
||||
ccacccttca caccaaaaac acaacaaaaa tccaaccccc ccccccgcac tagaaaacag
|
||||
ccccaccaaa ctccaaattt catcttttgg cggtatgcac ttttaacagt cacccctcaa
|
||||
ctaacatagt cagcccacca gtacaacccc cgcccgccct agcaacacac actgctgctg
|
||||
atcctatacc ccgaattaac caaaccccaa agacacccca caca
|
||||
File diff suppressed because it is too large
Load Diff
232
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.0.json
Normal file
232
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.0.json
Normal file
@@ -0,0 +1,232 @@
|
||||
{
|
||||
"protocol_version" : "0.0.4",
|
||||
"configuration" : {
|
||||
"version" : "(6.4.0.198) (2019-06/fe64a4765e6)",
|
||||
"tlc" : "normal",
|
||||
"sigsgev" : "altstack",
|
||||
"notifications" : "kqueue",
|
||||
"architecture" : "amd64",
|
||||
"disabled_features" : "none",
|
||||
"smallconfig" : "disabled",
|
||||
"bigarrays" : "disabled",
|
||||
"softdebug" : "enabled",
|
||||
"interpreter" : "enabled",
|
||||
"llvm_support" : "0",
|
||||
"suspend" : "hybrid"
|
||||
},
|
||||
"memory" : {
|
||||
"Resident Size" : "37834752",
|
||||
"Virtual Size" : "4466749440",
|
||||
"minor_gc_time" : "0",
|
||||
"major_gc_time" : "0",
|
||||
"minor_gc_count" : "0",
|
||||
"major_gc_count" : "0",
|
||||
"major_gc_time_concurrent" : "0"
|
||||
},
|
||||
"threads" : [
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x11437bdc0",
|
||||
"thread_info_addr" : "0x7f9d2d800000",
|
||||
"thread_name" : "tid_307",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4bace6",
|
||||
"SP" : "0x7ffee4485f08",
|
||||
"BP" : "0x7ffee4485fa0"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : true,
|
||||
"native_thread_id" : "0x70000643a000",
|
||||
"thread_info_addr" : "0x7f9d2e014600",
|
||||
"thread_name" : "Debugger agent",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4be7fa",
|
||||
"SP" : "0x7000064394f8",
|
||||
"BP" : "0x700006439520"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x700006237000",
|
||||
"thread_info_addr" : "0x7f9d2e800e00",
|
||||
"thread_name" : "Finalizer",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4b8296",
|
||||
"SP" : "0x700006236e48",
|
||||
"BP" : "0x700006236ef0"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
}
|
||||
]
|
||||
}
|
||||
232
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.1.json
Normal file
232
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.1.json
Normal file
@@ -0,0 +1,232 @@
|
||||
{
|
||||
"protocol_version" : "0.0.4",
|
||||
"configuration" : {
|
||||
"version" : "(6.4.0.198) (2019-06/fe64a4765e6)",
|
||||
"tlc" : "normal",
|
||||
"sigsgev" : "altstack",
|
||||
"notifications" : "kqueue",
|
||||
"architecture" : "amd64",
|
||||
"disabled_features" : "none",
|
||||
"smallconfig" : "disabled",
|
||||
"bigarrays" : "disabled",
|
||||
"softdebug" : "enabled",
|
||||
"interpreter" : "enabled",
|
||||
"llvm_support" : "0",
|
||||
"suspend" : "hybrid"
|
||||
},
|
||||
"memory" : {
|
||||
"Resident Size" : "37117952",
|
||||
"Virtual Size" : "4466745344",
|
||||
"minor_gc_time" : "0",
|
||||
"major_gc_time" : "0",
|
||||
"minor_gc_count" : "0",
|
||||
"major_gc_count" : "0",
|
||||
"major_gc_time_concurrent" : "0"
|
||||
},
|
||||
"threads" : [
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x104ff6dc0",
|
||||
"thread_info_addr" : "0x7fa20c001200",
|
||||
"thread_name" : "tid_307",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4bace6",
|
||||
"SP" : "0x7ffeec355f08",
|
||||
"BP" : "0x7ffeec355fa0"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x700001c9d000",
|
||||
"thread_info_addr" : "0x7fa20b800600",
|
||||
"thread_name" : "Finalizer",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4b8296",
|
||||
"SP" : "0x700001c9ce48",
|
||||
"BP" : "0x700001c9cef0"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : true,
|
||||
"native_thread_id" : "0x700001ea0000",
|
||||
"thread_info_addr" : "0x7fa20c802a00",
|
||||
"thread_name" : "Debugger agent",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4be7fa",
|
||||
"SP" : "0x700001e9f4f8",
|
||||
"BP" : "0x700001e9f520"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
}
|
||||
]
|
||||
}
|
||||
236
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.2.json
Normal file
236
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.2.json
Normal file
@@ -0,0 +1,236 @@
|
||||
{
|
||||
"protocol_version" : "0.0.4",
|
||||
"configuration" : {
|
||||
"version" : "(6.4.0.198) (2019-06/fe64a4765e6)",
|
||||
"tlc" : "normal",
|
||||
"sigsgev" : "altstack",
|
||||
"notifications" : "kqueue",
|
||||
"architecture" : "amd64",
|
||||
"disabled_features" : "none",
|
||||
"smallconfig" : "disabled",
|
||||
"bigarrays" : "disabled",
|
||||
"softdebug" : "enabled",
|
||||
"interpreter" : "enabled",
|
||||
"llvm_support" : "0",
|
||||
"suspend" : "hybrid"
|
||||
},
|
||||
"memory" : {
|
||||
"Resident Size" : "39825408",
|
||||
"Virtual Size" : "4467929088",
|
||||
"minor_gc_time" : "0",
|
||||
"major_gc_time" : "0",
|
||||
"minor_gc_count" : "0",
|
||||
"major_gc_count" : "0",
|
||||
"major_gc_time_concurrent" : "0"
|
||||
},
|
||||
"threads" : [
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x700009e42000",
|
||||
"thread_info_addr" : "0x7fbe49816c00",
|
||||
"thread_name" : "Finalizer",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4b8296",
|
||||
"SP" : "0x700009e41e48",
|
||||
"BP" : "0x700009e41ef0"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : true,
|
||||
"native_thread_id" : "0x70000a045000",
|
||||
"thread_info_addr" : "0x7fbe49008400",
|
||||
"thread_name" : "Debugger agent",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4be7fa",
|
||||
"SP" : "0x70000a0444f8",
|
||||
"BP" : "0x70000a044520"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x11db44dc0",
|
||||
"thread_info_addr" : "0x7fbe49801200",
|
||||
"thread_name" : "tid_307",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4bace6",
|
||||
"SP" : "0x7ffedfd4def8",
|
||||
"BP" : "0x7ffedfd4df90"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
}
|
||||
]
|
||||
}
|
||||
236
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.3.json
Normal file
236
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.3.json
Normal file
@@ -0,0 +1,236 @@
|
||||
{
|
||||
"protocol_version" : "0.0.4",
|
||||
"configuration" : {
|
||||
"version" : "(6.4.0.198) (2019-06/fe64a4765e6)",
|
||||
"tlc" : "normal",
|
||||
"sigsgev" : "altstack",
|
||||
"notifications" : "kqueue",
|
||||
"architecture" : "amd64",
|
||||
"disabled_features" : "none",
|
||||
"smallconfig" : "disabled",
|
||||
"bigarrays" : "disabled",
|
||||
"softdebug" : "enabled",
|
||||
"interpreter" : "enabled",
|
||||
"llvm_support" : "0",
|
||||
"suspend" : "hybrid"
|
||||
},
|
||||
"memory" : {
|
||||
"Resident Size" : "25600000",
|
||||
"Virtual Size" : "4467929088",
|
||||
"minor_gc_time" : "0",
|
||||
"major_gc_time" : "0",
|
||||
"minor_gc_count" : "0",
|
||||
"major_gc_count" : "0",
|
||||
"major_gc_time_concurrent" : "0"
|
||||
},
|
||||
"threads" : [
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x116c59dc0",
|
||||
"thread_info_addr" : "0x7fd13000f200",
|
||||
"thread_name" : "tid_307",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4bace6",
|
||||
"SP" : "0x7ffee86f6ef8",
|
||||
"BP" : "0x7ffee86f6f90"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x700009fd4000",
|
||||
"thread_info_addr" : "0x7fd13002a600",
|
||||
"thread_name" : "Finalizer",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4b8296",
|
||||
"SP" : "0x700009fd3e48",
|
||||
"BP" : "0x700009fd3ef0"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : true,
|
||||
"native_thread_id" : "0x70000a1d7000",
|
||||
"thread_info_addr" : "0x7fd130041600",
|
||||
"thread_name" : "Debugger agent",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4be7fa",
|
||||
"SP" : "0x70000a1d64f8",
|
||||
"BP" : "0x70000a1d6520"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
}
|
||||
]
|
||||
}
|
||||
236
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.4.json
Normal file
236
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.4.json
Normal file
@@ -0,0 +1,236 @@
|
||||
{
|
||||
"protocol_version" : "0.0.4",
|
||||
"configuration" : {
|
||||
"version" : "(6.4.0.198) (2019-06/fe64a4765e6)",
|
||||
"tlc" : "normal",
|
||||
"sigsgev" : "altstack",
|
||||
"notifications" : "kqueue",
|
||||
"architecture" : "amd64",
|
||||
"disabled_features" : "none",
|
||||
"smallconfig" : "disabled",
|
||||
"bigarrays" : "disabled",
|
||||
"softdebug" : "enabled",
|
||||
"interpreter" : "enabled",
|
||||
"llvm_support" : "0",
|
||||
"suspend" : "hybrid"
|
||||
},
|
||||
"memory" : {
|
||||
"Resident Size" : "39002112",
|
||||
"Virtual Size" : "4466749440",
|
||||
"minor_gc_time" : "0",
|
||||
"major_gc_time" : "0",
|
||||
"minor_gc_count" : "0",
|
||||
"major_gc_count" : "0",
|
||||
"major_gc_time_concurrent" : "0"
|
||||
},
|
||||
"threads" : [
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : true,
|
||||
"native_thread_id" : "0x700004db3000",
|
||||
"thread_info_addr" : "0x7fdbd282e200",
|
||||
"thread_name" : "Debugger agent",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4be7fa",
|
||||
"SP" : "0x700004db24f8",
|
||||
"BP" : "0x700004db2520"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x700004bb0000",
|
||||
"thread_info_addr" : "0x7fdbd282d000",
|
||||
"thread_name" : "Finalizer",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4b8296",
|
||||
"SP" : "0x700004bafe48",
|
||||
"BP" : "0x700004bafef0"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x10e36cdc0",
|
||||
"thread_info_addr" : "0x7fdbd3000000",
|
||||
"thread_name" : "tid_307",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4bace6",
|
||||
"SP" : "0x7ffee3b7ceb8",
|
||||
"BP" : "0x7ffee3b7cf50"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
}
|
||||
]
|
||||
}
|
||||
236
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.5.json
Normal file
236
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.5.json
Normal file
@@ -0,0 +1,236 @@
|
||||
{
|
||||
"protocol_version" : "0.0.4",
|
||||
"configuration" : {
|
||||
"version" : "(6.4.0.198) (2019-06/fe64a4765e6)",
|
||||
"tlc" : "normal",
|
||||
"sigsgev" : "altstack",
|
||||
"notifications" : "kqueue",
|
||||
"architecture" : "amd64",
|
||||
"disabled_features" : "none",
|
||||
"smallconfig" : "disabled",
|
||||
"bigarrays" : "disabled",
|
||||
"softdebug" : "enabled",
|
||||
"interpreter" : "enabled",
|
||||
"llvm_support" : "0",
|
||||
"suspend" : "hybrid"
|
||||
},
|
||||
"memory" : {
|
||||
"Resident Size" : "38891520",
|
||||
"Virtual Size" : "4467793920",
|
||||
"minor_gc_time" : "0",
|
||||
"major_gc_time" : "0",
|
||||
"minor_gc_count" : "0",
|
||||
"major_gc_count" : "0",
|
||||
"major_gc_time_concurrent" : "0"
|
||||
},
|
||||
"threads" : [
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x700003d13000",
|
||||
"thread_info_addr" : "0x7feb54016c00",
|
||||
"thread_name" : "Finalizer",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4b8296",
|
||||
"SP" : "0x700003d12e48",
|
||||
"BP" : "0x700003d12ef0"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x11a147dc0",
|
||||
"thread_info_addr" : "0x7feb54802000",
|
||||
"thread_name" : "tid_307",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4bace6",
|
||||
"SP" : "0x7ffee2d7aea8",
|
||||
"BP" : "0x7ffee2d7af40"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : true,
|
||||
"native_thread_id" : "0x700003f16000",
|
||||
"thread_info_addr" : "0x7feb5401ca00",
|
||||
"thread_name" : "Debugger agent",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4be7fa",
|
||||
"SP" : "0x700003f154f8",
|
||||
"BP" : "0x700003f15520"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
}
|
||||
]
|
||||
}
|
||||
260
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.6.json
Normal file
260
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.6.json
Normal file
@@ -0,0 +1,260 @@
|
||||
{
|
||||
"protocol_version" : "0.0.4",
|
||||
"configuration" : {
|
||||
"version" : "(6.4.0.198) (2019-06/fe64a4765e6)",
|
||||
"tlc" : "normal",
|
||||
"sigsgev" : "altstack",
|
||||
"notifications" : "kqueue",
|
||||
"architecture" : "amd64",
|
||||
"disabled_features" : "none",
|
||||
"smallconfig" : "disabled",
|
||||
"bigarrays" : "disabled",
|
||||
"softdebug" : "enabled",
|
||||
"interpreter" : "enabled",
|
||||
"llvm_support" : "0",
|
||||
"suspend" : "hybrid"
|
||||
},
|
||||
"memory" : {
|
||||
"Resident Size" : "16523264",
|
||||
"Virtual Size" : "4466749440",
|
||||
"minor_gc_time" : "0",
|
||||
"major_gc_time" : "0",
|
||||
"minor_gc_count" : "0",
|
||||
"major_gc_count" : "0",
|
||||
"major_gc_time_concurrent" : "0"
|
||||
},
|
||||
"threads" : [
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x103ab0dc0",
|
||||
"thread_info_addr" : "0x7fedb000f200",
|
||||
"thread_name" : "tid_307",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4bace6",
|
||||
"SP" : "0x7ffeeeb739c8",
|
||||
"BP" : "0x7ffeeeb73a60"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x700003a7a000",
|
||||
"thread_info_addr" : "0x7fedb1007800",
|
||||
"thread_name" : "Finalizer",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4b8296",
|
||||
"SP" : "0x700003a79e48",
|
||||
"BP" : "0x700003a79ef0"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : true,
|
||||
"native_thread_id" : "0x700003c7d000",
|
||||
"thread_info_addr" : "0x7fedb1813400",
|
||||
"thread_name" : "Debugger agent",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4be7fa",
|
||||
"SP" : "0x700003c7c4f8",
|
||||
"BP" : "0x700003c7c520"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
}
|
||||
]
|
||||
}
|
||||
260
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.7.json
Normal file
260
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.7.json
Normal file
@@ -0,0 +1,260 @@
|
||||
{
|
||||
"protocol_version" : "0.0.4",
|
||||
"configuration" : {
|
||||
"version" : "(6.4.0.198) (2019-06/fe64a4765e6)",
|
||||
"tlc" : "normal",
|
||||
"sigsgev" : "altstack",
|
||||
"notifications" : "kqueue",
|
||||
"architecture" : "amd64",
|
||||
"disabled_features" : "none",
|
||||
"smallconfig" : "disabled",
|
||||
"bigarrays" : "disabled",
|
||||
"softdebug" : "enabled",
|
||||
"interpreter" : "enabled",
|
||||
"llvm_support" : "0",
|
||||
"suspend" : "hybrid"
|
||||
},
|
||||
"memory" : {
|
||||
"Resident Size" : "19746816",
|
||||
"Virtual Size" : "4459810816",
|
||||
"minor_gc_time" : "0",
|
||||
"major_gc_time" : "0",
|
||||
"minor_gc_count" : "0",
|
||||
"major_gc_count" : "0",
|
||||
"major_gc_time_concurrent" : "0"
|
||||
},
|
||||
"threads" : [
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x10c8b6dc0",
|
||||
"thread_info_addr" : "0x7f8b2780f200",
|
||||
"thread_name" : "tid_307",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4bace6",
|
||||
"SP" : "0x7ffeeed7e998",
|
||||
"BP" : "0x7ffeeed7ea30"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x7000059d5000",
|
||||
"thread_info_addr" : "0x7f8b28800800",
|
||||
"thread_name" : "Finalizer",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4b8296",
|
||||
"SP" : "0x7000059d4e48",
|
||||
"BP" : "0x7000059d4ef0"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : true,
|
||||
"native_thread_id" : "0x700005bd8000",
|
||||
"thread_info_addr" : "0x7f8b27818c00",
|
||||
"thread_name" : "Debugger agent",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4be7fa",
|
||||
"SP" : "0x700005bd74f8",
|
||||
"BP" : "0x700005bd7520"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
}
|
||||
]
|
||||
}
|
||||
260
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.8.json
Normal file
260
DNA_Alignment/DNA_Alignment/bin/Debug/mono_crash.0.8.json
Normal file
@@ -0,0 +1,260 @@
|
||||
{
|
||||
"protocol_version" : "0.0.4",
|
||||
"configuration" : {
|
||||
"version" : "(6.4.0.198) (2019-06/fe64a4765e6)",
|
||||
"tlc" : "normal",
|
||||
"sigsgev" : "altstack",
|
||||
"notifications" : "kqueue",
|
||||
"architecture" : "amd64",
|
||||
"disabled_features" : "none",
|
||||
"smallconfig" : "disabled",
|
||||
"bigarrays" : "disabled",
|
||||
"softdebug" : "enabled",
|
||||
"interpreter" : "enabled",
|
||||
"llvm_support" : "0",
|
||||
"suspend" : "hybrid"
|
||||
},
|
||||
"memory" : {
|
||||
"Resident Size" : "31916032",
|
||||
"Virtual Size" : "4459806720",
|
||||
"minor_gc_time" : "0",
|
||||
"major_gc_time" : "0",
|
||||
"minor_gc_count" : "0",
|
||||
"major_gc_count" : "0",
|
||||
"major_gc_time_concurrent" : "0"
|
||||
},
|
||||
"threads" : [
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x70000d300000",
|
||||
"thread_info_addr" : "0x7fa144803600",
|
||||
"thread_name" : "Finalizer",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4b8296",
|
||||
"SP" : "0x70000d2ffe48",
|
||||
"BP" : "0x70000d2ffef0"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : false,
|
||||
"native_thread_id" : "0x111a41dc0",
|
||||
"thread_info_addr" : "0x7fa145805c00",
|
||||
"thread_name" : "tid_307",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4bace6",
|
||||
"SP" : "0x7ffeedc81998",
|
||||
"BP" : "0x7ffeedc81a30"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"is_managed" : false,
|
||||
"offset_free_hash" : "0x0",
|
||||
"offset_rich_hash" : "0x0",
|
||||
"crashed" : true,
|
||||
"native_thread_id" : "0x70000d503000",
|
||||
"thread_info_addr" : "0x7fa14400b200",
|
||||
"thread_name" : "Debugger agent",
|
||||
"ctx" : {
|
||||
"IP" : "0x7fff6c4be7fa",
|
||||
"SP" : "0x70000d5024f8",
|
||||
"BP" : "0x70000d502520"
|
||||
},
|
||||
"unmanaged_frames" : [
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
,
|
||||
{
|
||||
"native_address" : "unregistered"
|
||||
}
|
||||
|
||||
]
|
||||
}
|
||||
]
|
||||
}
|
||||
@@ -0,0 +1,277 @@
|
||||
gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt
|
||||
cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc
|
||||
gcagtatctg tctttgattc ctgccccatt ccattattta tcgcacctac gttcaatatt
|
||||
acaggcgagc atacttactg aagtgtgtta attaattaat gcttgtagga cataataata
|
||||
acgactaaat gtctgcacag ctgctttcca cacagacatc ataacaaaaa atttccacca
|
||||
aaccccccct cccccgcttc tggccacagc acttaaacac atctctgcca aaccccaaaa
|
||||
acaaagaacc ctaacaccag cctaaccaga tttcaaattt tatcttttgg cggtatacac
|
||||
ttttaacagt caccccctaa ctaacacatt attttcccct cccactccca tactactaat
|
||||
ctcatcaata caacccccgc ccatcctacc cagcacacac cgctgctaac cccatacccc
|
||||
gagccaacca aaccccaaag acacccccca cagtttatgt agcttacctc ctcaaagcaa
|
||||
tacactgaaa atgtttagac gggctcacat caccccataa acaaataggt ttggtcctag
|
||||
cctttctatt agctcttagt aagattacac atgcaagcat ccccattcca gtgagttcac
|
||||
cctctaaatc accacgatca aaagggacaa gcatcaagca cgcaacaatg cagctcaaaa
|
||||
cgcttagcct agccacaccc ccacgggaaa cagcagtgat aagcctttag caataaacga
|
||||
aagtttaact aagctatact aaccccaggg ttggtcaatt tcgtgccagc caccgcggtc
|
||||
acacgattaa cccaagtcaa tagaagccgg cgtaaagagt gttttagatc accccctccc
|
||||
caataaagct aaaactcacc tgagttgtaa aaaactccag ttgacacaaa ataaactacg
|
||||
aaagtggctt taacatatct gaacacacaa tagctaagac ccaaactggg attagatacc
|
||||
ccactatgct tagccctaaa cctcaacagt taaatcaaca aaactgctcg ccagaacact
|
||||
acgagccaca gcttaaaact caaaggacct ggcggtgctt catatccctc tagaggagcc
|
||||
tgttctgtaa tcgataaacc ccgatcaacc tcaccacctc ttgctcagcc tatataccgc
|
||||
catcttcagc aaaccctgat gaaggctaca aagtaagcgc aagtacccac gtaaagacgt
|
||||
taggtcaagg tgtagcccat gaggtggcaa gaaatgggct acattttcta ccccagaaaa
|
||||
ctacgatagc ccttatgaaa cctaagggtc gaaggtggat ttagcagtaa actgagagta
|
||||
gagtgcttag ttgaacaggg ccctgaagcg cgtacacacc gcccgtcacc ctcctcaagt
|
||||
atacttcaaa ggacatttaa ctaaaacccc tacgcattta tatagaggag acaagtcgta
|
||||
acatggtaag tgtactggaa agtgcacttg gacgaaccag agtgtagctt aacacaaagc
|
||||
acccaactta cacttaggag atttcaactt aacttgaccg ctctgagcta aacctagccc
|
||||
caaacccact ccaccttact accaaacaac cttagccaaa ccatttaccc aaataaagta
|
||||
taggcgatag aaattgaaac ctggcgcaat agatgtagta ccgcaaggga aagatgaaaa
|
||||
attataacca agcataatat agcaaggact aacccctata ccttctgcat aatgaattaa
|
||||
ctagaaataa ctttgcaagg agagccaaag ctaagacccc cgaaaccaga cgagctacct
|
||||
aagaacagct aaaagagcac acccgtctat gtagcaaaat agtgggaaga tttataggta
|
||||
gaggcgacaa acctaccgag cctggtgata gctggttgtc caagatagaa tcttagttca
|
||||
actttaaatt tacccacaga accctctaaa tccccttgta aatttaactg ttagtccaaa
|
||||
gaggaacagc tctttggaca ctaggaaaaa accttgtaga gagagtaaaa aatttaacac
|
||||
ccatagtagg cctaaaagca gccaccaatt aagaaagcgt tcaagctcaa cacccactac
|
||||
ctaaaaaatc ccaaacatat aactgaactc ctcacaccca attggaccaa tctatcaccc
|
||||
tatagaagaa ctaatgttag tataagtaac atgaaaacat tctcctccgc ataagcctgc
|
||||
gtcagattaa aacactgaac tgacaattaa cagcccaata tctacaatca accaacaagt
|
||||
cattattacc ctcactgtca acccaacaca ggcatgctca taaggaaagg ttaaaaaaag
|
||||
taaaaggaac tcggcaaatc ttaccccgcc tgtttaccaa aaacatcacc tctagcatta
|
||||
ccagtattag aggcaccgcc tgcccagtga cacatgttta acggccgcgg taccctaacc
|
||||
gtgcaaaggt agcataatca cttgttcctt aaatagggac ctgtatgaat ggctccacga
|
||||
gggttcagct gtctcttact tttaaccagt gaaattgacc tgcccgtgaa gaggcgggca
|
||||
taacacagca agacgagaag accctatgga gctttaattt attaatgcaa acagtaccta
|
||||
acaaacccac aggtcctaaa ctaccaaacc tgcattaaaa atttcggttg gggcgacctc
|
||||
ggagcacaac ccaacctccg agcagtacat gctaagacct caccagtcaa agcgaactac
|
||||
catactcaat tgatccaata acttgaccaa cggaacaagt taccctaggg ataacagcgc
|
||||
aatcctattc tagagtccat atcaacaata gggtttacga cctcgatgtt ggatcaggac
|
||||
atcccaatgg tgcagccgct attaaaggtt cgtttgttca acgattaaag tcctacgtga
|
||||
tctgagttca gaccggagta atccaggtcg gtttctatct acttcaaatt cctccctgta
|
||||
cgaaaggaca agagaaataa ggcctacttc acaaagcgcc ttcccccgta aatgatatca
|
||||
tctcaactta gtattatacc cacacccacc caagaacagg gtttgttaag atggcagagc
|
||||
ccggtaatcg cataaaactt aaaactttac agtcagaggt tcaattcctc ttcttaacaa
|
||||
cacacccatg gccaacctcc tactcctcgt tgtacccatt ctaatcgcaa tggcattcct
|
||||
aatgcttacc gaacgaaaaa ttctaggcta tatgcaacta cgcaaaggtc ccaacgttgt
|
||||
aggcccctac gggctactac aacccttcgc tgacgccata aaactcttca ccaaagaacc
|
||||
cctaaaaccc gccacatcca ccatcaccct ctacatcacc gccccgacct tagctctcac
|
||||
catcgctctt ctactatgaa cccccctccc catacccaac cccctggtta acctcaacct
|
||||
aggcctccta tttattctag ccacctctag cctagccgtt tactcaatcc tctgatcagg
|
||||
gtgagcatca aactcaaact acgccctgat cggcgcactg cgagcagtag cccaaacaat
|
||||
ctcatatgaa gtcaccctag ccatcattct actatcaaca ttactaataa gtggctcctt
|
||||
taacctctcc acccttatca cagcacaaga acacctctga ttactcctgc catcatgacc
|
||||
cttggccata atatgattta tctccacact agcagagacc aaccgaaccc ccttcgacct
|
||||
tgctgaaggg gaatccgaac tagtctcagg ctttaacatc gaatacgccg caggcccctt
|
||||
cgccctattc ttcatagccg aatacacaaa cattattata ataaacaccc tcaccactac
|
||||
aatcttccta ggaacaacat ataacgcact ctcccctgaa ctctacacaa catattttgt
|
||||
caccaagacc ctacttctga cctccctgtt cttatgaatt cgaacagcat acccccgatt
|
||||
ccgctacgac caactcatac acctcctatg aaaaaacttc ctaccactca ccctagcact
|
||||
acttatatga tatgtctcca tacccattac aatctccagc attccccctc aaacctaaga
|
||||
aatatgtctg ataaaagagt tactttgata gagtaaataa taggagttta aaccccctta
|
||||
tttctaggac tatgagaatc gaacccatcc ctgagaatcc aaaattctcc gtgccaccta
|
||||
tcacacccca tcctaaagta aggtcagcta aataagctat cgggcccata ccccgaaaat
|
||||
gttggttata cccttcccgt actaattaat cccctggccc aacccgtcat ctactctacc
|
||||
atctttgcag gcacactcat cacagcacta agctcgcact gattttttac ctgagtgggc
|
||||
ctagaaataa acatgctagc ttttattcca gttctaacca aaaaaataaa ccctcgttcc
|
||||
acagaagctg ccatcaagta tttcctcacg caagcaaccg catccataat ccttctaata
|
||||
gctatcctct tcaacaatat actctccgga caatgaacca taaccaatac taccaatcaa
|
||||
tactcatcat taataatcat aatggctata gcaataaaac taggaatagc cccctttcac
|
||||
ttctgagtcc cagaggttac ccaaggcacc cctctgacat ccggcctgct ccttctcaca
|
||||
tgacaaaaac tagcccccat ctcaatcata taccaaattt ctccctcact aaacgtaagc
|
||||
ctcctcctca ctctttcaat cttatccatc atagcaggca gttgaggtgg attaaaccaa
|
||||
acccagctac gcaaaatctt agcatactcc tcaattaccc acataggatg aataatagca
|
||||
gttctaccgt acaaccctaa cataaccatt cttaatttaa ctatttatat tatcctaact
|
||||
actaccgcat tcctactact caacttaaac tccagcacca cgaccctact actatctcgc
|
||||
acctgaaaca agctaacatg actaacaccc ttaattccat ccaccctcct ctccctagga
|
||||
ggcctgcccc cgctaaccgg ctttttgccc aaatgggcca ttatcgaaga attcacaaaa
|
||||
aacaatagcc tcatcatccc caccatcata gccaccatca ccctccttaa cctctacttc
|
||||
tacctacgcc taatctactc cacctcaatc acactactcc ctatatctaa caacgtaaaa
|
||||
ataaaatgac agtttgaaca tacaaaaccc accccattcc tccccacact catcaccctt
|
||||
accacactac tcctacctat ctcccctttt atactaatag tcttatagaa atttaggtta
|
||||
aatacagacc aagagccttc aaagccctca gtaagttgca atacttaatt tctgcaacag
|
||||
ctaaggactg caaaacccca ctctgcatca actgaacgca aatcagccac tttaattaag
|
||||
ctaagccctt actagaccaa tgggactcaa acccacaaac acttagttaa cagctaagca
|
||||
ccctaatcaa ctggcttcaa tctacttctc ccgccgccgg gaaaaaaggc gggagaagcc
|
||||
ccggcaggtt tgaagctgct tcttcgaatt tgcaattcaa tatgaaaatc acctcagagc
|
||||
tggtaaaaag aggcttaacc cctgtcttta gatttacagt ccaatgcttc actcagccat
|
||||
tttacctcac ccccactgat gttcgccgac cgttgactat tctctacaaa ccacaaagac
|
||||
attggaacac tatacctact attcggcgca tgagctggag tcctaggcac agctctaagc
|
||||
ctccttattc gagccgaact gggccagcca ggcaaccttc taggtaacga ccacatctac
|
||||
aacgttatcg tcacagccca tgcatttgta ataatcttct tcatagtaat acccatcata
|
||||
atcgggggct ttggcaactg actagttccc ttaataatcg gtgcccccga tatggcgttt
|
||||
ccccgcataa acaatataag cttctgactc ttacctccct ctctcctact cctgctcgca
|
||||
tctgctatag tggaagccgg cgcaggaaca ggttgaacag tctaccctcc cttagcaggg
|
||||
aactactccc accctggagc ctccgtagac ctaaccatct tctccttaca cctagcaggt
|
||||
gtctcctcta tcttaggggc catcaatttc atcacaacaa ttattaatat aaaaccccct
|
||||
gccataaccc aataccaaac gccccttttc gtctgatccg tcctaatcac agcagtccta
|
||||
cttctcctat ctctcccagt cctagctgct ggcatcacta tactactaac agaccgcaac
|
||||
ctcaacacca ccttcttcga ccccgccgga ggaggagacc ccattctata ccaacaccta
|
||||
ttctgatttt tcggccaccc tgaagtttat attctcatcc taccaggctt cggaataatc
|
||||
tcccatattg taacttacta ctccggaaaa aaagaaccat ttggatacat aggtatggtc
|
||||
tgagctatga tatcaattgg cttcctaggg tttatcgtgt gagcacacca tatatttaca
|
||||
gtaggaatag acgtagacac acgagcatat ttcacctccg ctaccataat catcgctatc
|
||||
cccaccggcg tcaaagtatt tagctgactc gccacactcc acggaagcaa tatgaaatga
|
||||
tctgctgcag tgctctgagc cctaggattc atctttcttt tcaccgtagg tggcctgact
|
||||
ggcattgtat tagcaaactc atcactagac atcgtactac acgacacgta ctacgttgta
|
||||
gctcacttcc actatgtcct atcaatagga gctgtatttg ccatcatagg aggcttcatt
|
||||
cactgatttc ccctattctc cggctacacc ctagaccaaa cttacgccaa aatccatttc
|
||||
actatcatat tcatcggcgt aaatctaact ttcttcccac aacactttct cggcctatcc
|
||||
ggaatgcccc gacgttactc ggactacccc gatgcataca ccacatgaaa tatcctatca
|
||||
tctgtaggct cattcatttc tctaacagca gtaatattaa taattttcat gatttgagaa
|
||||
gccttcgctt cgaagcgaaa agtcctaata gtagaagaac cctccataaa cctggagtga
|
||||
ctatatggat gccccccacc ctaccacaca ttcgaagagc ccgtatacat aaaatctaga
|
||||
caaaaaagga aggaatcgaa ccccccaaag ctggtttcaa gccaacccca tggcctccat
|
||||
gactttttca aaaagatatt agaaaaacca tttcataact ttgtcaaagt taaattatag
|
||||
gctaaatcct atatatctta atggcacatg cagcgcaagt aggtctacaa gacgctactt
|
||||
cccctatcat agaagagctt atcatctttc atgatcacgc cctcataatc attttcctta
|
||||
tctgcttcct agtcctgtat gcccttttcc taacactcac aacaaaacta actaatacta
|
||||
gcatctcaga cgctcaggaa atagaaaccg tctgaactat cctgcccgcc atcatcctag
|
||||
tcctcatcgc cctcccatcc ctacgcatcc tttacataac agacgaggtc aacgacccct
|
||||
cctttaccat caaatcaatt ggccatcaat ggtactgaac ctacgagtac accgactacg
|
||||
gcggactaat cttcaactcc tacatacttc ccccattatt cctagaacca ggcgacctgc
|
||||
gactccttga cgttgacaat cgagtagtac tcccggttga agcccccatt cgtataataa
|
||||
ttacatcaca agacgtctta cactcatgag ctgtccccac attaggctta aaaacagatg
|
||||
caattcccgg acgtctaaac caaaccactt tcaccgctac acgaccgggg gtatactacg
|
||||
gtcaatgctc tgaaatctgt ggagcaaacc acagtttcat gcccatcgtc ctagaattaa
|
||||
ttcccctaaa aatctttgaa atagggcccg tatttaccct atagcacccc ctctaccccc
|
||||
tctagagccc actgtaaagc taacttagca ttaacctttt aagttaaaga ttaagagaac
|
||||
cagcacctct ttacagtgag atgccccaac taaatactac tgtatggccc accataatta
|
||||
tccccatact ccttacacta ttcctcatca cccaactaaa aatattaaat acaaattacc
|
||||
acttacctcc ctcaccaaag cccataaaaa taaaaaacta taacaaaccc tgagaaccaa
|
||||
aatgaacgaa aatctgttcg cttcattcat tgcccccaca atcctaggcc tacccgccgc
|
||||
agtactgatc attctatttc cccctctatt gatccccacc tccaaatatc tcatcaacaa
|
||||
ccgactaatt accacccaac aatgactaat caaactaacc tcaaaacaaa tgatagccat
|
||||
acacaacact aagggacgaa cctgatctct tatactagta tccttaatca tttttattac
|
||||
cacaactaac ctcctcggac tcctgcctca ctcatttaca ccaaccaccc aactatctat
|
||||
aaacctagcc atggccatcc ccttatgagc gggcgcagtg attataggct ttcgctctaa
|
||||
gattaaaaat gccctagccc acttcttacc acaaggcaca cctacacccc ttatccctat
|
||||
actagttatt atcgaaacca tcagcctact cattcaacca gtagccctgg ccgtacgcct
|
||||
aaccgctaac attactgcag gtcacctact catgcaccta attggaaacg ccaccctagc
|
||||
aatatcaacc attaaccttc cctctacact tatcatcttc acaattctaa ttctactgac
|
||||
tatcctagaa atcgctgtcg ccttaatcca agcctacgtt ttcacacttc tagtaagcct
|
||||
ctacctgcac gacaacacat aatgacccac caatcacatg cctatcatat agtaaaaccc
|
||||
agcccatgac ccctaacagg ggccctctca gccctcctaa tgacctccgg cctagccatg
|
||||
tgatttcact tccactccac aaccctcctc atactaggct tactaaccaa cacactaacc
|
||||
atataccaat gatggcgcga tgtaacacga gaaagcacat accaaggcca ccacacacca
|
||||
cctgtccaaa aaggccttcg atacgggata gtcctattta ttacctcaga agtttttttc
|
||||
ttcgcaggat ttttctgagc cttttaccac tccagcctag cccctacccc ccaactagga
|
||||
gggcactggc ccccaacagg catcaccccg ctaaatcccc tagaagtccc actcctaaac
|
||||
acatccgtat tactcgcatc aggagtatca atcacctgag ctcaccatag tctaatagaa
|
||||
aacaaccgaa accaaataat tcaagcactg cttattacaa ttttactggg tctctatttt
|
||||
accctcctac aagcctcaga gtacttcgaa tctcccttca ccatttccga cggcatctac
|
||||
ggctcaacat tttttgtagc cacaggcttc cacggacttc acgtcattat tggctcaact
|
||||
ttcctcacta tctgcttcat ccgtcaacta atatttcact ttacatccaa acatcacttt
|
||||
ggcttcgaag ccgccgcctg atactggcat tttgtagatg tggtttgact atttctgtat
|
||||
gtctccatct attgatgagg gtcttactct tttagtataa atagtaccgt taacttccaa
|
||||
ttaactagtt ttgacaacat tcaaaaaaga gtaataaact tcgccttaat tttaataatc
|
||||
aacaccctcc tagccctact actaataatt attacatttt gactaccaca actcaacggc
|
||||
tacatagaaa aatccacccc ttacgagtgc ggcttcgacc ctatatcccc cgcccgcgtc
|
||||
cctttctcca taaaattctt cttagtagct attaccttct tattatttga cctagaaatt
|
||||
gccctccttt tacccttacc atgagcccta caaacaacta atctaccact aatagttacg
|
||||
tcatccctct tattaatcat catcctagcc ctaagtctgg cctatgaatg actacaaaaa
|
||||
ggattagact gagccgaatt ggtatatagt ttaaacaaaa cgaatgattt cgactcatta
|
||||
aattatgata atcatattta ccaaatgccc ctcatttaca taaatattat actagcattt
|
||||
accatctcac ttctgggaat actagtgtat cgctcacacc tcatatcctc cctactatgc
|
||||
ctagaaggaa taatactatc gctgttcatt atagctactc tcataaccct caacacccac
|
||||
tccctcttag ccaatattgt gcctattgcc atactagttt ttgccgcctg cgaagcagcg
|
||||
gtaggcctag ccctactagt ctcaatctcc aacacatatg gcctagacta cgtacataac
|
||||
ctaagcctac tccaatgcta aaactaatcg tcccaacaat tatattacta ccactgacat
|
||||
gactctccaa aaaacacata atttgaatca acacaaccac ccacagccta attattagca
|
||||
tcatccccct actatttttt aaccaaatca acaacaacct atttagctgc tccccaacct
|
||||
tttcctccga ccccctaaca acccccctcc taatactaac tacctgactc ctacccctca
|
||||
caatcatggc aagccaacgc cacttatcca gtgaaccact atcacgaaaa aaactctacc
|
||||
tctctatact aatctcccta caaatctcct taattataac attcacagcc acagaactaa
|
||||
tcatatttta tatcttcttc gaaaccacac ttatccccac cttggctatc atcacccgat
|
||||
gaggcaacca gccagaacgc ctgaacgcag gcacatactt cctattctac accctagtag
|
||||
gctcccttcc cctactcatc gcactaattt acactcacaa caccctaggc tcactaaaca
|
||||
ttctactact cactctcact gcccaagaac tatcaaactc ctgagccaac aacttaatat
|
||||
gactagctta cacaatagct tttatagtaa agatacccct ttacggactc cacttatgac
|
||||
tccctaaagc ccatgtcgaa gcccccatcg ctgggtcaat agtacttgcc gctgtactct
|
||||
taaaactagg cggctatggt ataatacgcc tcacactcat tctcaacccc ctgacaaaac
|
||||
atatagccta ccccttcctt gtactatccc tatggggcat aattataaca agctccatct
|
||||
gcctgcgaca aacagaccta aaatcgctca ttgcatattc ttcaatcagc cacatagccc
|
||||
tcgtagtaac agccattctc atccaaaccc cctgaagctt caccggcgca gtcattctca
|
||||
taatcgccca cggacttaca tcctcattac tattctgcct agcaaactca aactacgaac
|
||||
gcacccacag tcgcatcata atcctctctc aaggacttca aactctactc ccactaatag
|
||||
ctttttgatg acttctagca agcctcgcta acctcgcctt accccccact attaacctac
|
||||
tgggagaact ctctgtgcta gtaaccacat tctcctgatc aaatatcact ctcctactta
|
||||
cagggctcaa catactagtc acagccctat actccctcta catatttacc acaacacaat
|
||||
ggggctcact cacccaccac attaacaaca taaaaccctc attcacacga gaaaacaccc
|
||||
tcatattcat acacctatcc cccattctcc tcctatccct caaccccgac atcattaccg
|
||||
ggttttcctc ttgtaaatat agtttaacca aaacatcaga ttgtgaatct gacaacagag
|
||||
gctcacgacc ccttatttac cgagaaagct cacaagaact gctaactcat gcccccatgt
|
||||
ctaacaacat ggctttctca acttttaaag gataacagct atccattggt cttaggcccc
|
||||
aaaaattttg gtgcaactcc aaataaaagt aataaccatg cacaccacta taaccaccct
|
||||
gaccctgact tccctaattc cccccatcct taccaccctc attaacccta acaaaaaaaa
|
||||
ctcatacccc cattatgtaa aatccattgt cgcatccacc tttattatta gtctcttccc
|
||||
cacaacaata ttcatgtgcc tagaccaaga agttattatc tcgaactgac actgagccac
|
||||
aacccaaaca acccagctct ccctaagctt caaactagac tacttctcca taatattcat
|
||||
ccctgtagca ttgttcgtta catggtccat catagaattc tcactgtgat atataaactc
|
||||
agacccaaac attaatcagt tcttcaaata tctactcatt ttcctaatta ccatactaat
|
||||
cttagttacc gctaacaacc tattccaact gttcatcggc tgagagggcg taggaattat
|
||||
atccttcttg ctcatcagtt gatgatacgc ccgagcagat gccaacacag cagccattca
|
||||
agcaatccta tacaaccgca tcggcgatat cggtttcatc ctcgccttag catgatttat
|
||||
cctacactcc aactcatgag acccacaaca aatagccctt ctaaacgcta atccaagcct
|
||||
caccccacta ctaggcctcc tcctagcagc agcaggcaaa tcagcccaat taggtctcca
|
||||
cccctgactc ccctcagcca tagaaggccc caccccagtc tcagccctac tccactcaag
|
||||
cactatagtc gtagcaggag tcttcttact catccgcttc caccccctag cagaaaatag
|
||||
cccactaatc caaactctaa cactatgctt aggcgctatc accactctat tcgcagcagt
|
||||
ctgcgccctt acacaaaatg acatcaaaaa aatcgtagcc ttctccactt caagtcaact
|
||||
agggctcata gtagttacaa tcggcatcaa ccaaccacac ctagcattcc tgcacatctg
|
||||
tacccacgcc ttcttcaaag ccatactatt tatatgctcc gggtccatca tccacaacct
|
||||
taacaatgaa caagatattc gaaaaatagg aggactactc aaaaccatac ctctcacttc
|
||||
aacctccctc accattggca gcctagcatt agcaggaata cctttcctca caggtttcta
|
||||
ctccaaagac cacatcatcg aaaccgcaaa catatcatac acaaacgcct gagccctatc
|
||||
tattactctc atcgctacct ccctgacaag cgcctatagc actcgaataa ttcttctcac
|
||||
cctaacaggt caacctcgct tccccaccct cactaacatt aacgaaaata accctaccct
|
||||
actaaacccc attaaacgcc tagcagccgg aagcctattc gcaggatttc tcattactaa
|
||||
caacatttcc cccgcatccc ccttccaaac aacaatcccc ctctacctaa aactcgcagc
|
||||
cctcgctgtc actttcctag gacttctaac agccctagac ctcaactacc taaccaacaa
|
||||
acttaaaata aaaaccccac tatacacatt ttatttctcc aacatactcg ggttctaccc
|
||||
tagcatcaca caccgcacaa tcccctatct aggccttctt acgagccaaa acctgcccct
|
||||
actcctccta gacctaacct gactagaaaa gctattacct aaaacaattt cacagcacca
|
||||
aatctccgcc tccatcacca cctcaaccca aaaaggcata attaaacttt acttcctctc
|
||||
tttcttcttc ccactcatcc taaccctact cctaatcata taacctattc ccccgagcaa
|
||||
tctcaattac aacatataca ccaacaaaca atgttcaacc agtaactact actaatcaac
|
||||
gcccataatc atacaaagcc cccgcaccaa taggatcctc ccgaatcaac cctgacccct
|
||||
ctccttcata gattattcag cttcctacac tattaaagtt taccacaacc accaccccat
|
||||
catactcttt cacccacagc accaatccta cctccatcgc taaccccact aaaacactca
|
||||
ccaagacctc aacccctgac ccccatgcct caggatactc ctcaatagcc atcgctgtag
|
||||
tatatccaaa gacaaccatc attcccccta aataaattaa aaaaactatt aaacccatat
|
||||
aacctccccc aaaattcaga ataataacac acccaaccac accgctaaca atcaatacta
|
||||
aacccccata aataggagaa ggcttagaag aaaaccccac aaaccccatt actaaaccca
|
||||
cactcaacag aaacaaagca tacatcatta ttctcgcacg gactacaacc acgaccaatg
|
||||
atatgaaaaa ccatcgttgt atttcaacta caagaacacc aatgacccca atacgcaaaa
|
||||
ttaaccccct aataaaatta attaaccact cattcatcga cctccccacc ccatccaaca
|
||||
tctccgcatg atgaaacttc ggctcactcc ttggcgcctg cctgatcctc caaatcacca
|
||||
caggactatt cctagccatg cactactcac cagacgcctc gaccgccttt tcatcaatcg
|
||||
cccacatcac tcgagacgta aattatggct gaatcatccg ctaccttcac gccaatggcg
|
||||
cctcaatatt ctttatctgc ctcttcctac acatcggacg aggcctatat tacggatcat
|
||||
ttctctactc aaaaacctga aacatcggca ttatcctcct gcttgcaact atagcaacag
|
||||
ccttcatagg ctatgtcctc ccatgaggcc aaatatcatt ctgaggggcc acagtaatta
|
||||
caaacctact atccgccatc ccatacattg ggacagacct ggttcagtga atctgaggag
|
||||
gctactcagt agacagtccc accctcacac gattctttac ctttcacttt atcttaccct
|
||||
tcattattgc agccctagca gcactccacc tcctattctt gcacgaaaca ggatcaaaca
|
||||
accccctagg aatcacctcc cattccgata aaatcacctt ccacccttac tacacaatca
|
||||
aagacgccct cggcttattt ctcttccttc tctccttaat gacattaaca ctactctcac
|
||||
cagacctcct aggcgaccca gacaattata ccctagccaa ccccttaaac acccctcccc
|
||||
acatcaagcc cgaatgatat ttcctattcg cctacacaat tctccgatcc gtccctaaca
|
||||
aactaggagg cgtccttgcc ctactactat ccatcctcat cctggcaata atccccatcc
|
||||
ttcatgtatc caaacaacaa agcataatat ttcgcccact aagccaatca ctttattgac
|
||||
tcctagccgc agacctcctc attctaacct gaatcggagg acaaccagta agctaccctt
|
||||
ttatcatcat tggacaagta gcatccgtac tatacttcac aacaatccta atcctaatac
|
||||
caaccatctc cctaattgaa aacaaaatac tcaaatgggc ctgtccttgt agtataaact
|
||||
aatacaccag tcttgtaaac cggagatgaa aacctttttc caaggacaaa tcagagaaaa
|
||||
agtctttaac tccaccatta gcacccaaag ctaagattct aatttaaact attctctgtt
|
||||
ctttcatggg ggagcagatt tgggtaccac ccaagtattg actcacccat cagcaaccgc
|
||||
tatgtatttc gtacattact gccagccacc atgaatattg tacagtacca taattacttg
|
||||
actacctgca gtacataaaa acctaatcca catcaacccc ccccccccat gcttacaagc
|
||||
aagcacagca atcaaccttc aactgtcata catcaactac aactccaaag acgcccttac
|
||||
acccactagg atatcaacaa acctacccac ccttgacagt acatagcaca taaagtcatt
|
||||
taccgtacat agcacattac agtcaaatcc cttctcgccc ccatggatga cccccctcag
|
||||
ataggggtcc cttgatcacc atcctccgtg aaatcaatat cccgcacaag agtgctactc
|
||||
tcctcgctcc gggcccataa cacttggggg tagctaaagt gaactgtatc cgacatctgg
|
||||
ttcctacttc agggccataa agcctaaata gcccacacgt tccccttaaa taagacatca
|
||||
cgatg
|
||||
File diff suppressed because it is too large
Load Diff
File diff suppressed because it is too large
Load Diff
@@ -0,0 +1,277 @@
|
||||
gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt
|
||||
cgtctggggg gtatgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc
|
||||
gcagtatctg tctttgattc ctgcctcatc ctattattta tcgcacctac gttcaatatt
|
||||
acaggcgaac atacttacta aagtgtgtta attaattaat gcttgtagga cataataata
|
||||
acaattgaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca
|
||||
aaccccccct cccccgcttc tggccacagc acttaaacac atctctgcca aaccccaaaa
|
||||
acaaagaacc ctaacaccag cctaaccaga tttcaaattt tatcttttgg cggtatgcac
|
||||
ttttaacagt caccccccaa ctaacacatt attttcccct cccactccca tactactaat
|
||||
ctcatcaata caacccccgc ccatcctacc cagcacacac acaccgctgc taaccccata
|
||||
ccccgaacca accaaacccc aaagacaccc cccacagttt atgtagctta cctcctcaaa
|
||||
gcaatacact gaaaatgttt agacgggctc acatcacccc ataaacaaat aggtttggtc
|
||||
ctagcctttc tattagctct tagtaagatt acacatgcaa gcatccccgt tccagtgagt
|
||||
tcaccctcta aatcaccacg atcaaaagga acaagcatca agcacgcagc aatgcagctc
|
||||
aaaacgctta gcctagccac acccccacgg gaaacagcag tgattaacct ttagcaataa
|
||||
acgaaagttt aactaagcta tactaacccc agggttggtc aatttcgtgc cagccaccgc
|
||||
ggtcacacga ttaacccaag tcaatagaag ccggcgtaaa gagtgtttta gatcaccccc
|
||||
tccccaataa agctaaaact cacctgagtt gtaaaaaact ccagttgaca caaaatagac
|
||||
tacgaaagtg gctttaacat atctgaacac acaatagcta agacccaaac tgggattaga
|
||||
taccccacta tgcttagccc taaacctcaa cagttaaatc aacaaaactg ctcgccagaa
|
||||
cactacgagc cacagcttaa aactcaaagg acctggcggt gcttcatatc cctctagagg
|
||||
agcctgttct gtaatcgata aaccccgatc aacctcacca cctcttgctc agcctatata
|
||||
ccgccatctt cagcaaaccc tgatgaaggc tacaaagtaa gcgcaagtac ccacgtaaag
|
||||
acgttaggtc aaggtgtagc ccatgaggtg gcaagaaatg ggctacattt tctaccccag
|
||||
aaaactacga tagcccttat gaaacttaag ggtcgaaggt ggatttagca gtaaactaag
|
||||
agtagagtgc ttagttgaac agggccctga agcgcgtaca caccgcccgt caccctcctc
|
||||
aagtatactt caaaggacat ttaactaaaa cccctacgca tttatataga ggagacaagt
|
||||
cgtaacatgg taagtgtact ggaaagtgca cttggacgaa ccagagtgta gcttaacaca
|
||||
aagcacccaa cttacactta ggagatttca acttaacttg accgctctga gctaaaccta
|
||||
gccccaaacc cactccacct tactaccaga caaccttagc caaaccattt acccaaataa
|
||||
agtataggcg atagaaattg aaacctggcg caatagatat agtaccgcaa gggaaagatg
|
||||
aaaaattata accaagcata atatagcaag gactaacccc tataccttct gcataatgaa
|
||||
ttaactagaa ataactttgc aaggagagcc aaagctaaga cccccgaaac cagacgagct
|
||||
acctaagaac agctaaaaga gcacacccgt ctatgtagca aaatagtggg aagatttata
|
||||
ggtagaggcg acaaacctac cgagcctggt gatagctggt tgtccaagat agaatcttag
|
||||
ttcaacttta aatttgccca cagaaccctc taaatcccct tgtaaattta actgttagtc
|
||||
caaagaggaa cagctctttg gacactagga aaaaaccttg tagagagagt aaaaaattta
|
||||
acacccatag taggcctaaa agcagccacc aattaagaaa gcgttcaagc tcaacaccca
|
||||
ctacctaaaa aatcccaaac atataactga actcctcaca cccaattgga ccaatctatc
|
||||
accctataga agaactaatg ttagtataag taacatgaaa acattctcct ccgcataagc
|
||||
ctgcgtcaga ttaaaacact gaactgacaa ttaacagccc aatatctaca atcaaccaac
|
||||
aagtcattat taccctcact gtcaacccaa cacaggcatg ctcataagga aaggttaaaa
|
||||
aaagtaaaag gaactcggca aatcttaccc cgcctgttta ccaaaaacat cacctctagc
|
||||
atcaccagta ttagaggcac cgcctgccca gtgacacatg tttaacggcc gcggtaccct
|
||||
aaccgtgcaa aggtagcata atcacttgtt ccttaaatag ggacctgtat gaatggctcc
|
||||
acgagggttc agctgtctct tacttttaac cagtgaaatt gacctgcccg tgaagaggcg
|
||||
ggcataacac agcaagacga gaagacccta tggagcttta atttattaat gcaaacagta
|
||||
cctaacaaac ccacaggtcc taaactacca aacctgcatt aaaaatttcg gttggggcga
|
||||
cctcggagca gaacccaacc tccgagcagt acatgctaag acttcaccag tcaaagcgaa
|
||||
ctactatact caattgatcc aataacttga ccaacggaac aagttaccct agggataaca
|
||||
gcgcaatcct attctagagt ccatatcaac aatagggttt acgacctcga tgttggatca
|
||||
ggacatcccg atggtgcagc cgctattaaa ggttcgtttg ttcaacgatt aaagtcctac
|
||||
gtgatctgag ttcagaccgg agtaatccag gtcggtttct atctacnttc aaattcctcc
|
||||
ctgtacgaaa ggacaagaga aataaggcct acttcacaaa gcgccttccc ccgtaaatga
|
||||
tatcatctca acttagtatt atacccacac ccacccaaga acagggtttg ttaagatggc
|
||||
agagcccggt aatcgcataa aacttaaaac tttacagtca gaggttcaat tcctcttctt
|
||||
aacaacatac ccatggccaa cctcctactc ctcattgtac ccattctaat cgcaatggca
|
||||
ttcctaatgc ttaccgaacg aaaaattcta ggctatatac aactacgcaa aggccccaac
|
||||
gttgtaggcc cctacgggct actacaaccc ttcgctgacg ccataaaact cttcaccaaa
|
||||
gagcccctaa aacccgccac atctaccatc accctctaca tcaccgcccc gaccttagct
|
||||
ctcaccatcg ctcttctact atgaaccccc ctccccatac ccaaccccct ggtcaacctc
|
||||
aacctaggcc tcctatttat tctagccacc tctagcctag ccgtttactc aatcctctga
|
||||
tcagggtgag catcaaactc aaactacgcc ctgatcggcg cactgcgagc agtagcccaa
|
||||
acaatctcat atgaagtcac cctagccatc attctactat caacattact aataagtggc
|
||||
tcctttaacc tctccaccct tatcacaaca caagaacacc tctgattact cctgccatca
|
||||
tgacccttgg ccataatatg atttatctcc acactagcag agaccaaccg aacccccttc
|
||||
gaccttgccg aaggggagtc cgaactagtc tcaggcttca acatcgaata cgccgcaggc
|
||||
cccttcgccc tattcttcat agccgaatac acaaacatta ttataataaa caccctcacc
|
||||
actacaatct tcctaggaac aacatatgac gcactctccc ctgaactcta cacaacatat
|
||||
tttgtcacca agaccctact tctaacctcc ctgttcttat gaattcgaac agcatacccc
|
||||
cgattccgct acgaccaact catacacctc ctatgaaaaa acttcctacc actcacccta
|
||||
gcattactta tatgatatgt ctccataccc attacaatct ccagcattcc ccctcaaacc
|
||||
taagaaatat gtctgataaa agagttactt tgatagagta aataatagga gcttaaaccc
|
||||
ccttatttct aggactatga gaatcgaacc catccctgag aatccaaaat tctccgtgcc
|
||||
acctatcaca ccccatccta aagtaaggtc agctaaataa gctatcgggc ccataccccg
|
||||
aaaatgttgg ttataccctt cccgtactaa ttaatcccct ggcccaaccc gtcatctact
|
||||
ctaccatctt tgcaggcaca ctcatcacag cgctaagctc gcactgattt tttacctgag
|
||||
taggcctaga aataaacatg ctagctttta ttccagttct aaccaaaaaa ataaaccctc
|
||||
gttccacaga agctgccatc aagtatttcc tcacgcaagc aaccgcatcc ataatccttc
|
||||
taatagctat cctcttcaac aatatactct ccggacaatg aaccataacc aatactacca
|
||||
atcaatactc atcattaata atcataatag ctatagcaat aaaactagga atagccccct
|
||||
ttcacttctg agtcccagag gttacccaag gcacccctct gacatccggc ctgcttcttc
|
||||
tcacatgaca aaaactagcc cccatctcaa tcatatacca aatctctccc tcactaaacg
|
||||
taagccttct cctcactctc tcaatcttat ccatcatagc aggcagttga ggtggattaa
|
||||
accaaaccca gctacgcaaa atcttagcat actcctcaat tacccacata ggatgaataa
|
||||
tagcagttct accgtacaac cctaacataa ccattcttaa tttaactatt tatattatcc
|
||||
taactactac cgcattccta ctactcaact taaactccag caccacgacc ctactactat
|
||||
ctcgcacctg aaacaagcta acatgactaa cacccttaat tccatccacc ctcctctccc
|
||||
taggaggcct gcccccgcta accggctttt tgcccaaatg ggccattatc gaagaattca
|
||||
caaaaaacaa tagcctcatc atccccacca tcatagccac catcaccctc cttaacctct
|
||||
acttctacct acgcctaatc tactccacct caatcacact actccccata tctaacaacg
|
||||
taaaaataaa atgacagttt gaacatacaa aacccacccc attcctcccc acactcatcg
|
||||
cccttaccac gctactccta cctatctccc cttttatact aataatctta tagaaattta
|
||||
ggttaaatac agaccaagag ccttcaaagc cctcagtaag ttgcaatact taatttctgt
|
||||
aacagctaag gactgcaaaa ccccactctg catcaactga acgcaaatca gccactttaa
|
||||
ttaagctaag cccttactag accaatggga cttaaaccca caaacactta gttaacagct
|
||||
aagcacccta atcaactggc ttcaatctac ttctcccgcc gccgggaaaa aaggcgggag
|
||||
aagccccggc aggtttgaag ctgcttcttc gaatttgcaa ttcaatatga aaatcacctc
|
||||
ggagctggta aaaagaggcc taacccctgt ctttagattt acagtccaat gcttcactca
|
||||
gccattttac ctcaccccca ctgatgttcg ccgaccgttg actattctct acaaaccaca
|
||||
aagacattgg aacactatac ctattattcg gcgcatgagc tggagtccta ggcacagctc
|
||||
taagcctcct tattcgagcc gagctgggcc agccaggcaa ccttctaggt aacgaccaca
|
||||
tctacaacgt tatcgtcaca gcccatgcat ttgtaataat cttcttcata gtaataccca
|
||||
tcataatcgg aggctttggc aactgactag ttcccctaat aatcggtgcc cccgatatgg
|
||||
cgtttccccg cataaacaac ataagcttct gactcttacc tccctctctc ctactcctgc
|
||||
tcgcatctgc tatagtggag gccggagcag gaacaggttg aacagtctac cctcccttag
|
||||
cagggaacta ctcccaccct ggagcctccg tagacctaac catcttctcc ttacacctag
|
||||
caggtgtctc ctctatctta ggggccatca atttcatcac aacaattatc aatataaaac
|
||||
cccctgccat aacccaatac caaacgcccc tcttcgtctg atccgtccta atcacagcag
|
||||
tcctacttct cctatctctc ccagtcctag ctgctggcat cactatacta ctaacagacc
|
||||
gcaacctcaa caccaccttc ttcgaccccg ccggaggagg agaccccatt ctataccaac
|
||||
acctattctg atttttcggt caccctgaag tttatattct tatcctacca ggcttcggaa
|
||||
taatctccca tattgtaact tactactccg gaaaaaaaga accatttgga tacataggta
|
||||
tggtctgagc tatgatatca attggcttcc tagggtttat cgtgtgagca caccatatat
|
||||
ttacagtagg aatagacgta gacacacgag catatttcac ctccgctacc ataatcatcg
|
||||
ctatccccac cggcgtcaaa gtatttagct gactcgccac actccacgga agcaatatga
|
||||
aatgatctgc tgcagtgctc tgagccctag gattcatctt tcttttcacc gtaggtggcc
|
||||
tgactggcat tgtattagca aactcatcac tagacatcgt actacacgac acgtactacg
|
||||
ttgtagccca cttccactat gtcctatcaa taggagctgt atttgccatc ataggaggct
|
||||
tcattcactg atttccccta ttctcaggct acaccctaga ccaaacctac gccaaaatcc
|
||||
atttcactat catattcatc ggcgtaaatc taactttctt cccacaacac tttctcggcc
|
||||
tatccggaat gccccgacgt tactcggact accccgatgc atacaccaca tgaaacatcc
|
||||
tatcatctgt aggctcattc atttctctaa cagcagtaat attaataatt ttcatgattt
|
||||
gagaagcctt cgcttcgaag cgaaaagtcc taatagtaga agaaccctcc ataaacctgg
|
||||
agtgactata tggatgcccc ccaccctacc acacattcga agaacccgta tacataaaat
|
||||
ctagacaaaa aaggaaggaa tcgaaccccc caaagctggt ttcaagccaa ccccatggcc
|
||||
tccatgactt tttcaaaaag gtattagaaa aaccatttca taactttgtc aaagttaaat
|
||||
tataggctaa atcctatata tcttaatggc acatgcagcg caagtaggtc tacaagacgc
|
||||
tacttcccct atcatagaag agcttatcac ctttcatgat cacgccctca taatcatttt
|
||||
ccttatctgc ttcctagtcc tgtatgccct tttcctaaca ctcacaacaa aactaactaa
|
||||
tactaacatc tcagacgctc aggaaataga aaccgtctga actatcctgc ccgccatcat
|
||||
cctagtcctc atcgccctcc catccctacg catcctttac ataacagacg aggtcaacga
|
||||
tccctccctt accatcaaat caattggcca ccaatggtac tgaacctacg agtacaccga
|
||||
ctacggcgga ctaatcttca actcctacat acttccccca ttattcctag aaccaggcga
|
||||
cctgcgactc cttgacgttg acaatcgagt agtactcccg attgaagccc ccattcgtat
|
||||
aataattaca tcacaagacg tcttgcactc atgagctgtc cccacattag gcttaaaaac
|
||||
agatgcaatt cccggacgtc taaaccaaac cactttcacc gctacacgac cgggggtata
|
||||
ctacggtcaa tgctctgaaa tctgtggagc aaaccacagt ttcatgccca tcgtcctaga
|
||||
attaattccc ctaaaaatct ttgaaatagg gcccgtattt accctatagc accccctcta
|
||||
ccccctctag agcccactgt aaagctaact tagcattaac cttttaagtt aaagattaag
|
||||
agaaccaaca cctctttaca gtgaaatgcc ccaactaaat actaccgtat ggcccaccat
|
||||
aattaccccc atactcctta cactattcct catcacccaa ctaaaaatat taaacacaaa
|
||||
ctaccaccta cctccctcac caaagcccat aaaaataaaa aattataaca aaccctgaga
|
||||
accaaaatga acgaaaatct gttcgcttca ttcattgccc ccacaatcct aggcctaccc
|
||||
gccgcagtac tgatcattct atttccccct ctattgatcc ccacctccaa atatctcatc
|
||||
aacaaccgac taatcaccac ccaacaatga ctaatcaaac taacctcaaa acaaatgata
|
||||
accatacaca acactaaagg acgaacctga tctcttatac tagtatcctt aatcattttt
|
||||
attgccacaa ctaacctcct cggactcctg cctcactcat ttacaccaac cacccaacta
|
||||
tctataaacc tagccatggc catcccctta tgagcgggca cagtgattat aggctttcgc
|
||||
tctaagatta aaaatgccct agcccacttc ttaccacaag gcacacctac accccttatc
|
||||
cccatactag ttattatcga aaccatcagc ctactcattc aaccaatagc cctggccgta
|
||||
cgcctaaccg ctaacattac tgcaggccac ctactcatgc acctaattgg aagcgccacc
|
||||
ctagcaatat caaccattaa ccttccctct acacttatca tcttcacaat tctaattcta
|
||||
ctgactatcc tagaaatcgc tgtcgcctta atccaagcct acgttttcac acttctagta
|
||||
agcctctacc tgcacgacaa cacataatga cccaccaatc acatgcctat catatagtaa
|
||||
aacccagccc atgaccccta acaggggccc tctcagccct cctaatgacc tccggcctag
|
||||
ccatgtgatt tcacttccac tccataacgc tcctcatact aggcctacta accaacacac
|
||||
taaccatata ccaatgatgg cgcgatgtaa cacgagaaag cacataccaa ggccaccaca
|
||||
caccacctgt ccaaaaaggc cttcgatacg ggataatcct atttattacc tcagaagttt
|
||||
ttttcttcgc aggatttttc tgagcctttt accactccag cctagcccct accccccaat
|
||||
taggagggca ctggccccca acaggcatca ccccgctaaa tcccctagaa gtcccactcc
|
||||
taaacacatc cgtattactc gcatcaggag tatcaatcac ctgagctcac catagtctaa
|
||||
tagaaaacaa ccgaaaccaa ataattcaag cactgcttat tacaatttta ctgggtctct
|
||||
attttaccct cctacaagcc tcagagtact tcgagtctcc cttcaccatt tccgacggca
|
||||
tctacggctc aacatttttt gtagccacag gcttccacgg acttcacgtc attattggct
|
||||
caactttcct cactatctgc ttcatccgcc aactaatatt tcactttaca tccaaacatc
|
||||
actttggctt cgaagccgcc gcctgatact ggcattttgt agatgtggtt tgactatttc
|
||||
tgtatgtctc catctattga tgagggtctt actcttttag tataaatagt accgttaact
|
||||
tccaattaac tagttttgac aacattcaaa aaagagtaat aaacttcgcc ttaattttaa
|
||||
taatcaacac cctcctagcc ttactactaa taattattac attttgacta ccacaactca
|
||||
acggctacat agaaaaatcc accccttacg agtgcggctt cgaccctata tcccccgccc
|
||||
gcgtcccttt ctccataaaa ttcttcttag tagctattac cttcttatta tttgatctag
|
||||
aaattgccct ccttttaccc ctaccatgag ccctacaaac aactaacctg ccactaatag
|
||||
ttatgtcatc cctcttatta atcatcatcc tagccctaag tctggcctat gagtgactac
|
||||
aaaaaggatt agactgaacc gaattggtat atagtttaaa caaaacgaat gatttcgact
|
||||
cattaaatta tgataatcat atttaccaaa tgcccctcat ttacataaat attatactag
|
||||
catttaccat ctcacttcta ggaatactag tatatcgctc acacctcata tcctccctac
|
||||
tatgcctaga aggaataata ctatcgctgt tcattatagc tactctcata accctcaaca
|
||||
cccactccct cttagccaat attgtgccta ttgccatact agtctttgcc gcctgcgaag
|
||||
cagcggtggg cctagcccta ctagtctcaa tctccaacac atatggccta gactacgtac
|
||||
ataacctaaa cctactccaa tgctaaaact aatcgtccca acaattatat tactaccact
|
||||
gacatgactt tccaaaaaac acataatttg aatcaacaca accacccaca gcctaattat
|
||||
tagcatcatc cctctactat tttttaacca aatcaacaac aacctattta gctgttcccc
|
||||
aaccttttcc tccgaccccc taacaacccc cctcctaata ctaactacct gactcctacc
|
||||
cctcacaatc atggcaagcc aacgccactt atccagtgaa ccactatcac gaaaaaaact
|
||||
ctacctctct atactaatct ccctacaaat ctccttaatt ataacattca cagccacaga
|
||||
actaatcata ttttatatct tcttcgaaac cacacttatc cccaccttgg ctatcatcac
|
||||
ccgatgaggc aaccagccag aacgcctgaa cgcaggcaca tacttcctat tctacaccct
|
||||
agtaggctcc cttcccctac tcatcgcact aatttacact cacaacaccc taggctcact
|
||||
aaacattcta ctactcactc tcactgccca agaactatca aactcctgag ccaacaactt
|
||||
aatatgacta gcttacacaa tagcttttat agtaaagata cctctttacg gactccactt
|
||||
atgactccct aaagcccatg tcgaagcccc catcgctggg tcaatagtac ttgccgcagt
|
||||
actcttaaaa ctaggcggct atggtataat acgcctcaca ctcattctca accccctgac
|
||||
aaaacacata gcctacccct tccttgtact atccctatga ggcataatta taacaagctc
|
||||
catctgccta cgacaaacag acctaaaatc gctcattgca tactcttcaa tcagccacat
|
||||
agccctcgta gtaacagcca ttctcatcca aaccccctga agcttcaccg gcgcagtcat
|
||||
tctcataatc gcccacgggc ttacatcctc attactattc tgcctagcaa actcaaacta
|
||||
cgaacgcact cacagtcgca tcataatcct ctctcaagga cttcaaactc tactcccact
|
||||
aatagctttt tgatgacttc tagcaagcct cgctaacctc gccttacccc ccactattaa
|
||||
cctactggga gaactctctg tgctagtaac cacgttctcc tgatcaaata tcactctcct
|
||||
acttacagga ctcaacatac tagtcacagc cctatactcc ctctacatat ttaccacaac
|
||||
acaatggggc tcactcaccc accacattaa caacataaaa ccctcattca cacgagaaaa
|
||||
caccctcatg ttcatacacc tatcccccat tctcctccta tccctcaacc ccgacatcat
|
||||
taccgggttt tcctcttgta aatatagttt aaccaaaaca tcagattgtg aatctgacaa
|
||||
cagaggctta cgacccctta tttaccgaga aagctcacaa gaactgctaa ctcatgcccc
|
||||
catgtctaac aacatggctt tctcaacttt taaaggataa cagctatcca ttggtcttag
|
||||
gccccaaaaa ttttggtgca actccaaata aaagtaataa ccatgcacac tactataacc
|
||||
accctaaccc tgacttccct aattcccccc atccttacca ccctcgttaa ccctaacaaa
|
||||
aaaaactcat acccccatta tgtaaaatcc attgtcgcat ccacctttat tatcagtctc
|
||||
ttccccacaa caatattcat gtgcctagac caagaagtta ttatctcgaa ctgacactga
|
||||
gccacaaccc aaacaaccca gctctcccta agcttcaaac tagactactt ctccataata
|
||||
ttcatccctg tagcattgtt cgttacatgg tccatcatag aattctcact gtgatatata
|
||||
aactcagacc caaacattaa tcagttcttc aaatatctac tcatcttcct aattaccata
|
||||
ctaatcttag ttaccgctaa caacctattc caactgttca tcggctgaga gggcgtagga
|
||||
attatatcct tcttgctcat cagttgatga tacgcccgag cagatgccaa cacagcagcc
|
||||
attcaagcaa tcctatacaa ccgtatcggc gatatcggtt tcatcctcgc cttagcatga
|
||||
tttatcctac actccaactc atgagaccca caacaaatag cccttctaaa cgctaatcca
|
||||
agcctcaccc cactactagg cctcctccta gcagcagcag gcaaatcagc ccaattaggt
|
||||
ctccacccct gactcccctc agccatagaa ggccccaccc cagtctcagc cctactccac
|
||||
tcaagcacta tagttgtagc aggaatcttc ttactcatcc gcttccaccc cctagcagaa
|
||||
aatagcccac taatccaaac tctaacacta tgcttaggcg ctatcaccac tctgttcgca
|
||||
gcagtctgcg cccttacaca aaatgacatc aaaaaaatcg tagccttctc cacttcaagt
|
||||
caactaggac tcataatagt tacaatcggc atcaaccaac cacacctagc attcctgcac
|
||||
atctgtaccc acgccttctt caaagccata ctatttatgt gctccgggtc catcatccac
|
||||
aaccttaaca atgaacaaga tattcgaaaa ataggaggac tactcaaaac catacctctc
|
||||
acttcaacct ccctcaccat tggcagccta gcattagcag gaataccttt cctcacaggt
|
||||
ttctactcca aagaccacat catcgaaacc gcaaacatat catacacaaa cgcctgagcc
|
||||
ctatctatta ctctcatcgc tacctccctg acaagcgcct atagcactcg aataattctt
|
||||
ctcaccctaa caggtcaacc tcgcttcccc acccttacta acattaacga aaataacccc
|
||||
accctactaa accccattaa acgcctggca gccggaagcc tattcgcagg atttctcatt
|
||||
actaacaaca tttcccccgc atcccccttc caaacaacaa tccccctcta cctaaaactc
|
||||
acagccctcg ctgtcacttt cctaggactt ctaacagccc tagacctcaa ctacctaacc
|
||||
aacaaactta aaataaaatc cccactatgc acattttatt tctccaacat actcggattc
|
||||
taccctagca tcacacaccg cacaatcccc tatctaggcc ttcttacgag ccaaaacctg
|
||||
cccctactcc tcctagacct aacctgacta gaaaagctat tacctaaaac aatttcacag
|
||||
caccaaatct ccacctccat catcacctca acccaaaaag gcataattaa actttacttc
|
||||
ctctctttct tcttcccact catcctaacc ctactcctaa tcacataacc tattcccccg
|
||||
agcaatctca attacaatat atacaccaac aaacaatgtt caaccagtaa ctactactaa
|
||||
tcaacgccca taatcataca aagcccccgc accaatagga tcctcccgaa tcaaccctga
|
||||
cccctctcct tcataaatta ttcagcttcc tacactatta aagtttacca caaccaccac
|
||||
cccatcatac tctttcaccc acagcaccaa tcctacctcc atcgctaacc ccactaaaac
|
||||
actcaccaag acctcaaccc ctgaccccca tgcctcagga tactcctcaa tagccatcgc
|
||||
tgtagtatat ccaaagacaa ccatcattcc ccctaaataa attaaaaaaa ctattaaacc
|
||||
catataacct cccccaaaat tcagaataat aacacacccg accacaccgc taacaatcaa
|
||||
tactaaaccc ccataaatag gagaaggctt agaagaaaac cccacaaacc ccattactaa
|
||||
acccacactc aacagaaaca aagcatacat cattattctc gcacggacta caaccacgac
|
||||
caatgatatg aaaaaccatc gttgtatttc aactacaaga acaccaatga ccccaatacg
|
||||
caaaactaac cccctaataa aattaattaa ccactcattc atcgacctcc ccaccccatc
|
||||
caacatctcc gcatgatgaa acttcggctc actccttggc gcctgcctga tcctccaaat
|
||||
caccacagga ctattcctag ccatgcacta ctcaccagac gcctcaaccg ccttttcatc
|
||||
aatcgcccac atcactcgag acgtaaatta tggctgaatc atccgctacc ttcacgccaa
|
||||
tggcgcctca atattcttta tctgcctctt cctacacatc gggcgaggcc tatattacgg
|
||||
atcatttctc tactcagaaa cctgaaacat cggcattatc ctcctgcttg caactatagc
|
||||
aacagccttc ataggctatg tcctcccgtg aggccaaata tcattctgag gggccacagt
|
||||
aattacaaac ttactatccg ccatcccata cattgggaca gacctagttc aatgaatctg
|
||||
aggaggctac tcagtagaca gtcccaccct cacacgattc tttacctttc acttcatctt
|
||||
gcccttcatt attgcagccc tagcaacact ccacctccta ttcttgcacg aaacgggatc
|
||||
aaacaacccc ctaggaatca cctcccattc cgataaaatc accttccacc cttactacac
|
||||
aatcaaagac gccctcggct tacttctctt ccttctctcc ttaatgacat taacactatt
|
||||
ctcaccagac ctcctaggcg acccagacaa ttatacccta gccaacccct taaacacccc
|
||||
tccccacatc aagcccgaat gatatttcct attcgcctac acaattctcc gatccgtccc
|
||||
taacaaacta ggaggcgtcc ttgccctatt actatccatc ctcatcctag caataatccc
|
||||
catcctccat atatccaaac aacaaagcat aatatttcgc ccactaagcc aatcacttta
|
||||
ttgactccta gccgcagacc tcctcattct aacctgaatc ggaggacaac cagtaagcta
|
||||
cccttttacc atcattggac aagtagcatc cgtactatac ttcacaacaa tcctaatcct
|
||||
aataccaact atctccctaa ttgaaaacaa aatactcaaa tgggcctgtc cttgtagtat
|
||||
aaactaatac accagtcttg taaaccggag atgaaaacct ttttccaagg acaaatcaga
|
||||
gaaaaagtct ttaactccac cattagcacc caaagctaag attctaattt aaactattct
|
||||
ctgttctttc atggggaagc agatttgggt accacccaag tattgactca cccatcaaca
|
||||
accgctatgt atttcgtaca ttactgccag ccaccatgaa tattgtacgg taccataaat
|
||||
acttgaccac ctgtagtaca taaaaaccca atccacatca aaaccccctc cccatgctta
|
||||
caagcaagta cagcaatcaa ccctcaacta tcacacatca actgcaactc caaagccacc
|
||||
cctcacccac taggatacca acaaacctac ccacccttaa cagtacatag tacataaagc
|
||||
catttaccgt acatagcaca ttacagtcaa atcccttctc gtccccatgg atgacccccc
|
||||
tcagataggg gtcccttgac caccatcctc cgtgaaatca atatcccgca caagagtgct
|
||||
actctcctcg ctccgggccc ataacacttg ggggtagcta aagtgaactg tatccgacat
|
||||
ctggttccta cttcagggtc ataaagccta aatagcccac acgttcccct taaataagac
|
||||
atcacgatg
|
||||
277
DNA_Alignment/DNA_Alignment/neanderthal.txt
Normal file
277
DNA_Alignment/DNA_Alignment/neanderthal.txt
Normal file
@@ -0,0 +1,277 @@
|
||||
gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt
|
||||
cgtctggggg gtgtgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc
|
||||
gcagtatctg tctttgattc ctgccccatt ccattattta tcgcacctac gttcaatatt
|
||||
acaggcgagc atacttactg aagtgtgtta attaattaat gcttgtagga cataataata
|
||||
acgactaaat gtctgcacag ctgctttcca cacagacatc ataacaaaaa atttccacca
|
||||
aaccccccct cccccgcttc tggccacagc acttaaacac atctctgcca aaccccaaaa
|
||||
acaaagaacc ctaacaccag cctaaccaga tttcaaattt tatcttttgg cggtatacac
|
||||
ttttaacagt caccccctaa ctaacacatt attttcccct cccactccca tactactaat
|
||||
ctcatcaata caacccccgc ccatcctacc cagcacacac cgctgctaac cccatacccc
|
||||
gagccaacca aaccccaaag acacccccca cagtttatgt agcttacctc ctcaaagcaa
|
||||
tacactgaaa atgtttagac gggctcacat caccccataa acaaataggt ttggtcctag
|
||||
cctttctatt agctcttagt aagattacac atgcaagcat ccccattcca gtgagttcac
|
||||
cctctaaatc accacgatca aaagggacaa gcatcaagca cgcaacaatg cagctcaaaa
|
||||
cgcttagcct agccacaccc ccacgggaaa cagcagtgat aagcctttag caataaacga
|
||||
aagtttaact aagctatact aaccccaggg ttggtcaatt tcgtgccagc caccgcggtc
|
||||
acacgattaa cccaagtcaa tagaagccgg cgtaaagagt gttttagatc accccctccc
|
||||
caataaagct aaaactcacc tgagttgtaa aaaactccag ttgacacaaa ataaactacg
|
||||
aaagtggctt taacatatct gaacacacaa tagctaagac ccaaactggg attagatacc
|
||||
ccactatgct tagccctaaa cctcaacagt taaatcaaca aaactgctcg ccagaacact
|
||||
acgagccaca gcttaaaact caaaggacct ggcggtgctt catatccctc tagaggagcc
|
||||
tgttctgtaa tcgataaacc ccgatcaacc tcaccacctc ttgctcagcc tatataccgc
|
||||
catcttcagc aaaccctgat gaaggctaca aagtaagcgc aagtacccac gtaaagacgt
|
||||
taggtcaagg tgtagcccat gaggtggcaa gaaatgggct acattttcta ccccagaaaa
|
||||
ctacgatagc ccttatgaaa cctaagggtc gaaggtggat ttagcagtaa actgagagta
|
||||
gagtgcttag ttgaacaggg ccctgaagcg cgtacacacc gcccgtcacc ctcctcaagt
|
||||
atacttcaaa ggacatttaa ctaaaacccc tacgcattta tatagaggag acaagtcgta
|
||||
acatggtaag tgtactggaa agtgcacttg gacgaaccag agtgtagctt aacacaaagc
|
||||
acccaactta cacttaggag atttcaactt aacttgaccg ctctgagcta aacctagccc
|
||||
caaacccact ccaccttact accaaacaac cttagccaaa ccatttaccc aaataaagta
|
||||
taggcgatag aaattgaaac ctggcgcaat agatgtagta ccgcaaggga aagatgaaaa
|
||||
attataacca agcataatat agcaaggact aacccctata ccttctgcat aatgaattaa
|
||||
ctagaaataa ctttgcaagg agagccaaag ctaagacccc cgaaaccaga cgagctacct
|
||||
aagaacagct aaaagagcac acccgtctat gtagcaaaat agtgggaaga tttataggta
|
||||
gaggcgacaa acctaccgag cctggtgata gctggttgtc caagatagaa tcttagttca
|
||||
actttaaatt tacccacaga accctctaaa tccccttgta aatttaactg ttagtccaaa
|
||||
gaggaacagc tctttggaca ctaggaaaaa accttgtaga gagagtaaaa aatttaacac
|
||||
ccatagtagg cctaaaagca gccaccaatt aagaaagcgt tcaagctcaa cacccactac
|
||||
ctaaaaaatc ccaaacatat aactgaactc ctcacaccca attggaccaa tctatcaccc
|
||||
tatagaagaa ctaatgttag tataagtaac atgaaaacat tctcctccgc ataagcctgc
|
||||
gtcagattaa aacactgaac tgacaattaa cagcccaata tctacaatca accaacaagt
|
||||
cattattacc ctcactgtca acccaacaca ggcatgctca taaggaaagg ttaaaaaaag
|
||||
taaaaggaac tcggcaaatc ttaccccgcc tgtttaccaa aaacatcacc tctagcatta
|
||||
ccagtattag aggcaccgcc tgcccagtga cacatgttta acggccgcgg taccctaacc
|
||||
gtgcaaaggt agcataatca cttgttcctt aaatagggac ctgtatgaat ggctccacga
|
||||
gggttcagct gtctcttact tttaaccagt gaaattgacc tgcccgtgaa gaggcgggca
|
||||
taacacagca agacgagaag accctatgga gctttaattt attaatgcaa acagtaccta
|
||||
acaaacccac aggtcctaaa ctaccaaacc tgcattaaaa atttcggttg gggcgacctc
|
||||
ggagcacaac ccaacctccg agcagtacat gctaagacct caccagtcaa agcgaactac
|
||||
catactcaat tgatccaata acttgaccaa cggaacaagt taccctaggg ataacagcgc
|
||||
aatcctattc tagagtccat atcaacaata gggtttacga cctcgatgtt ggatcaggac
|
||||
atcccaatgg tgcagccgct attaaaggtt cgtttgttca acgattaaag tcctacgtga
|
||||
tctgagttca gaccggagta atccaggtcg gtttctatct acttcaaatt cctccctgta
|
||||
cgaaaggaca agagaaataa ggcctacttc acaaagcgcc ttcccccgta aatgatatca
|
||||
tctcaactta gtattatacc cacacccacc caagaacagg gtttgttaag atggcagagc
|
||||
ccggtaatcg cataaaactt aaaactttac agtcagaggt tcaattcctc ttcttaacaa
|
||||
cacacccatg gccaacctcc tactcctcgt tgtacccatt ctaatcgcaa tggcattcct
|
||||
aatgcttacc gaacgaaaaa ttctaggcta tatgcaacta cgcaaaggtc ccaacgttgt
|
||||
aggcccctac gggctactac aacccttcgc tgacgccata aaactcttca ccaaagaacc
|
||||
cctaaaaccc gccacatcca ccatcaccct ctacatcacc gccccgacct tagctctcac
|
||||
catcgctctt ctactatgaa cccccctccc catacccaac cccctggtta acctcaacct
|
||||
aggcctccta tttattctag ccacctctag cctagccgtt tactcaatcc tctgatcagg
|
||||
gtgagcatca aactcaaact acgccctgat cggcgcactg cgagcagtag cccaaacaat
|
||||
ctcatatgaa gtcaccctag ccatcattct actatcaaca ttactaataa gtggctcctt
|
||||
taacctctcc acccttatca cagcacaaga acacctctga ttactcctgc catcatgacc
|
||||
cttggccata atatgattta tctccacact agcagagacc aaccgaaccc ccttcgacct
|
||||
tgctgaaggg gaatccgaac tagtctcagg ctttaacatc gaatacgccg caggcccctt
|
||||
cgccctattc ttcatagccg aatacacaaa cattattata ataaacaccc tcaccactac
|
||||
aatcttccta ggaacaacat ataacgcact ctcccctgaa ctctacacaa catattttgt
|
||||
caccaagacc ctacttctga cctccctgtt cttatgaatt cgaacagcat acccccgatt
|
||||
ccgctacgac caactcatac acctcctatg aaaaaacttc ctaccactca ccctagcact
|
||||
acttatatga tatgtctcca tacccattac aatctccagc attccccctc aaacctaaga
|
||||
aatatgtctg ataaaagagt tactttgata gagtaaataa taggagttta aaccccctta
|
||||
tttctaggac tatgagaatc gaacccatcc ctgagaatcc aaaattctcc gtgccaccta
|
||||
tcacacccca tcctaaagta aggtcagcta aataagctat cgggcccata ccccgaaaat
|
||||
gttggttata cccttcccgt actaattaat cccctggccc aacccgtcat ctactctacc
|
||||
atctttgcag gcacactcat cacagcacta agctcgcact gattttttac ctgagtgggc
|
||||
ctagaaataa acatgctagc ttttattcca gttctaacca aaaaaataaa ccctcgttcc
|
||||
acagaagctg ccatcaagta tttcctcacg caagcaaccg catccataat ccttctaata
|
||||
gctatcctct tcaacaatat actctccgga caatgaacca taaccaatac taccaatcaa
|
||||
tactcatcat taataatcat aatggctata gcaataaaac taggaatagc cccctttcac
|
||||
ttctgagtcc cagaggttac ccaaggcacc cctctgacat ccggcctgct ccttctcaca
|
||||
tgacaaaaac tagcccccat ctcaatcata taccaaattt ctccctcact aaacgtaagc
|
||||
ctcctcctca ctctttcaat cttatccatc atagcaggca gttgaggtgg attaaaccaa
|
||||
acccagctac gcaaaatctt agcatactcc tcaattaccc acataggatg aataatagca
|
||||
gttctaccgt acaaccctaa cataaccatt cttaatttaa ctatttatat tatcctaact
|
||||
actaccgcat tcctactact caacttaaac tccagcacca cgaccctact actatctcgc
|
||||
acctgaaaca agctaacatg actaacaccc ttaattccat ccaccctcct ctccctagga
|
||||
ggcctgcccc cgctaaccgg ctttttgccc aaatgggcca ttatcgaaga attcacaaaa
|
||||
aacaatagcc tcatcatccc caccatcata gccaccatca ccctccttaa cctctacttc
|
||||
tacctacgcc taatctactc cacctcaatc acactactcc ctatatctaa caacgtaaaa
|
||||
ataaaatgac agtttgaaca tacaaaaccc accccattcc tccccacact catcaccctt
|
||||
accacactac tcctacctat ctcccctttt atactaatag tcttatagaa atttaggtta
|
||||
aatacagacc aagagccttc aaagccctca gtaagttgca atacttaatt tctgcaacag
|
||||
ctaaggactg caaaacccca ctctgcatca actgaacgca aatcagccac tttaattaag
|
||||
ctaagccctt actagaccaa tgggactcaa acccacaaac acttagttaa cagctaagca
|
||||
ccctaatcaa ctggcttcaa tctacttctc ccgccgccgg gaaaaaaggc gggagaagcc
|
||||
ccggcaggtt tgaagctgct tcttcgaatt tgcaattcaa tatgaaaatc acctcagagc
|
||||
tggtaaaaag aggcttaacc cctgtcttta gatttacagt ccaatgcttc actcagccat
|
||||
tttacctcac ccccactgat gttcgccgac cgttgactat tctctacaaa ccacaaagac
|
||||
attggaacac tatacctact attcggcgca tgagctggag tcctaggcac agctctaagc
|
||||
ctccttattc gagccgaact gggccagcca ggcaaccttc taggtaacga ccacatctac
|
||||
aacgttatcg tcacagccca tgcatttgta ataatcttct tcatagtaat acccatcata
|
||||
atcgggggct ttggcaactg actagttccc ttaataatcg gtgcccccga tatggcgttt
|
||||
ccccgcataa acaatataag cttctgactc ttacctccct ctctcctact cctgctcgca
|
||||
tctgctatag tggaagccgg cgcaggaaca ggttgaacag tctaccctcc cttagcaggg
|
||||
aactactccc accctggagc ctccgtagac ctaaccatct tctccttaca cctagcaggt
|
||||
gtctcctcta tcttaggggc catcaatttc atcacaacaa ttattaatat aaaaccccct
|
||||
gccataaccc aataccaaac gccccttttc gtctgatccg tcctaatcac agcagtccta
|
||||
cttctcctat ctctcccagt cctagctgct ggcatcacta tactactaac agaccgcaac
|
||||
ctcaacacca ccttcttcga ccccgccgga ggaggagacc ccattctata ccaacaccta
|
||||
ttctgatttt tcggccaccc tgaagtttat attctcatcc taccaggctt cggaataatc
|
||||
tcccatattg taacttacta ctccggaaaa aaagaaccat ttggatacat aggtatggtc
|
||||
tgagctatga tatcaattgg cttcctaggg tttatcgtgt gagcacacca tatatttaca
|
||||
gtaggaatag acgtagacac acgagcatat ttcacctccg ctaccataat catcgctatc
|
||||
cccaccggcg tcaaagtatt tagctgactc gccacactcc acggaagcaa tatgaaatga
|
||||
tctgctgcag tgctctgagc cctaggattc atctttcttt tcaccgtagg tggcctgact
|
||||
ggcattgtat tagcaaactc atcactagac atcgtactac acgacacgta ctacgttgta
|
||||
gctcacttcc actatgtcct atcaatagga gctgtatttg ccatcatagg aggcttcatt
|
||||
cactgatttc ccctattctc cggctacacc ctagaccaaa cttacgccaa aatccatttc
|
||||
actatcatat tcatcggcgt aaatctaact ttcttcccac aacactttct cggcctatcc
|
||||
ggaatgcccc gacgttactc ggactacccc gatgcataca ccacatgaaa tatcctatca
|
||||
tctgtaggct cattcatttc tctaacagca gtaatattaa taattttcat gatttgagaa
|
||||
gccttcgctt cgaagcgaaa agtcctaata gtagaagaac cctccataaa cctggagtga
|
||||
ctatatggat gccccccacc ctaccacaca ttcgaagagc ccgtatacat aaaatctaga
|
||||
caaaaaagga aggaatcgaa ccccccaaag ctggtttcaa gccaacccca tggcctccat
|
||||
gactttttca aaaagatatt agaaaaacca tttcataact ttgtcaaagt taaattatag
|
||||
gctaaatcct atatatctta atggcacatg cagcgcaagt aggtctacaa gacgctactt
|
||||
cccctatcat agaagagctt atcatctttc atgatcacgc cctcataatc attttcctta
|
||||
tctgcttcct agtcctgtat gcccttttcc taacactcac aacaaaacta actaatacta
|
||||
gcatctcaga cgctcaggaa atagaaaccg tctgaactat cctgcccgcc atcatcctag
|
||||
tcctcatcgc cctcccatcc ctacgcatcc tttacataac agacgaggtc aacgacccct
|
||||
cctttaccat caaatcaatt ggccatcaat ggtactgaac ctacgagtac accgactacg
|
||||
gcggactaat cttcaactcc tacatacttc ccccattatt cctagaacca ggcgacctgc
|
||||
gactccttga cgttgacaat cgagtagtac tcccggttga agcccccatt cgtataataa
|
||||
ttacatcaca agacgtctta cactcatgag ctgtccccac attaggctta aaaacagatg
|
||||
caattcccgg acgtctaaac caaaccactt tcaccgctac acgaccgggg gtatactacg
|
||||
gtcaatgctc tgaaatctgt ggagcaaacc acagtttcat gcccatcgtc ctagaattaa
|
||||
ttcccctaaa aatctttgaa atagggcccg tatttaccct atagcacccc ctctaccccc
|
||||
tctagagccc actgtaaagc taacttagca ttaacctttt aagttaaaga ttaagagaac
|
||||
cagcacctct ttacagtgag atgccccaac taaatactac tgtatggccc accataatta
|
||||
tccccatact ccttacacta ttcctcatca cccaactaaa aatattaaat acaaattacc
|
||||
acttacctcc ctcaccaaag cccataaaaa taaaaaacta taacaaaccc tgagaaccaa
|
||||
aatgaacgaa aatctgttcg cttcattcat tgcccccaca atcctaggcc tacccgccgc
|
||||
agtactgatc attctatttc cccctctatt gatccccacc tccaaatatc tcatcaacaa
|
||||
ccgactaatt accacccaac aatgactaat caaactaacc tcaaaacaaa tgatagccat
|
||||
acacaacact aagggacgaa cctgatctct tatactagta tccttaatca tttttattac
|
||||
cacaactaac ctcctcggac tcctgcctca ctcatttaca ccaaccaccc aactatctat
|
||||
aaacctagcc atggccatcc ccttatgagc gggcgcagtg attataggct ttcgctctaa
|
||||
gattaaaaat gccctagccc acttcttacc acaaggcaca cctacacccc ttatccctat
|
||||
actagttatt atcgaaacca tcagcctact cattcaacca gtagccctgg ccgtacgcct
|
||||
aaccgctaac attactgcag gtcacctact catgcaccta attggaaacg ccaccctagc
|
||||
aatatcaacc attaaccttc cctctacact tatcatcttc acaattctaa ttctactgac
|
||||
tatcctagaa atcgctgtcg ccttaatcca agcctacgtt ttcacacttc tagtaagcct
|
||||
ctacctgcac gacaacacat aatgacccac caatcacatg cctatcatat agtaaaaccc
|
||||
agcccatgac ccctaacagg ggccctctca gccctcctaa tgacctccgg cctagccatg
|
||||
tgatttcact tccactccac aaccctcctc atactaggct tactaaccaa cacactaacc
|
||||
atataccaat gatggcgcga tgtaacacga gaaagcacat accaaggcca ccacacacca
|
||||
cctgtccaaa aaggccttcg atacgggata gtcctattta ttacctcaga agtttttttc
|
||||
ttcgcaggat ttttctgagc cttttaccac tccagcctag cccctacccc ccaactagga
|
||||
gggcactggc ccccaacagg catcaccccg ctaaatcccc tagaagtccc actcctaaac
|
||||
acatccgtat tactcgcatc aggagtatca atcacctgag ctcaccatag tctaatagaa
|
||||
aacaaccgaa accaaataat tcaagcactg cttattacaa ttttactggg tctctatttt
|
||||
accctcctac aagcctcaga gtacttcgaa tctcccttca ccatttccga cggcatctac
|
||||
ggctcaacat tttttgtagc cacaggcttc cacggacttc acgtcattat tggctcaact
|
||||
ttcctcacta tctgcttcat ccgtcaacta atatttcact ttacatccaa acatcacttt
|
||||
ggcttcgaag ccgccgcctg atactggcat tttgtagatg tggtttgact atttctgtat
|
||||
gtctccatct attgatgagg gtcttactct tttagtataa atagtaccgt taacttccaa
|
||||
ttaactagtt ttgacaacat tcaaaaaaga gtaataaact tcgccttaat tttaataatc
|
||||
aacaccctcc tagccctact actaataatt attacatttt gactaccaca actcaacggc
|
||||
tacatagaaa aatccacccc ttacgagtgc ggcttcgacc ctatatcccc cgcccgcgtc
|
||||
cctttctcca taaaattctt cttagtagct attaccttct tattatttga cctagaaatt
|
||||
gccctccttt tacccttacc atgagcccta caaacaacta atctaccact aatagttacg
|
||||
tcatccctct tattaatcat catcctagcc ctaagtctgg cctatgaatg actacaaaaa
|
||||
ggattagact gagccgaatt ggtatatagt ttaaacaaaa cgaatgattt cgactcatta
|
||||
aattatgata atcatattta ccaaatgccc ctcatttaca taaatattat actagcattt
|
||||
accatctcac ttctgggaat actagtgtat cgctcacacc tcatatcctc cctactatgc
|
||||
ctagaaggaa taatactatc gctgttcatt atagctactc tcataaccct caacacccac
|
||||
tccctcttag ccaatattgt gcctattgcc atactagttt ttgccgcctg cgaagcagcg
|
||||
gtaggcctag ccctactagt ctcaatctcc aacacatatg gcctagacta cgtacataac
|
||||
ctaagcctac tccaatgcta aaactaatcg tcccaacaat tatattacta ccactgacat
|
||||
gactctccaa aaaacacata atttgaatca acacaaccac ccacagccta attattagca
|
||||
tcatccccct actatttttt aaccaaatca acaacaacct atttagctgc tccccaacct
|
||||
tttcctccga ccccctaaca acccccctcc taatactaac tacctgactc ctacccctca
|
||||
caatcatggc aagccaacgc cacttatcca gtgaaccact atcacgaaaa aaactctacc
|
||||
tctctatact aatctcccta caaatctcct taattataac attcacagcc acagaactaa
|
||||
tcatatttta tatcttcttc gaaaccacac ttatccccac cttggctatc atcacccgat
|
||||
gaggcaacca gccagaacgc ctgaacgcag gcacatactt cctattctac accctagtag
|
||||
gctcccttcc cctactcatc gcactaattt acactcacaa caccctaggc tcactaaaca
|
||||
ttctactact cactctcact gcccaagaac tatcaaactc ctgagccaac aacttaatat
|
||||
gactagctta cacaatagct tttatagtaa agatacccct ttacggactc cacttatgac
|
||||
tccctaaagc ccatgtcgaa gcccccatcg ctgggtcaat agtacttgcc gctgtactct
|
||||
taaaactagg cggctatggt ataatacgcc tcacactcat tctcaacccc ctgacaaaac
|
||||
atatagccta ccccttcctt gtactatccc tatggggcat aattataaca agctccatct
|
||||
gcctgcgaca aacagaccta aaatcgctca ttgcatattc ttcaatcagc cacatagccc
|
||||
tcgtagtaac agccattctc atccaaaccc cctgaagctt caccggcgca gtcattctca
|
||||
taatcgccca cggacttaca tcctcattac tattctgcct agcaaactca aactacgaac
|
||||
gcacccacag tcgcatcata atcctctctc aaggacttca aactctactc ccactaatag
|
||||
ctttttgatg acttctagca agcctcgcta acctcgcctt accccccact attaacctac
|
||||
tgggagaact ctctgtgcta gtaaccacat tctcctgatc aaatatcact ctcctactta
|
||||
cagggctcaa catactagtc acagccctat actccctcta catatttacc acaacacaat
|
||||
ggggctcact cacccaccac attaacaaca taaaaccctc attcacacga gaaaacaccc
|
||||
tcatattcat acacctatcc cccattctcc tcctatccct caaccccgac atcattaccg
|
||||
ggttttcctc ttgtaaatat agtttaacca aaacatcaga ttgtgaatct gacaacagag
|
||||
gctcacgacc ccttatttac cgagaaagct cacaagaact gctaactcat gcccccatgt
|
||||
ctaacaacat ggctttctca acttttaaag gataacagct atccattggt cttaggcccc
|
||||
aaaaattttg gtgcaactcc aaataaaagt aataaccatg cacaccacta taaccaccct
|
||||
gaccctgact tccctaattc cccccatcct taccaccctc attaacccta acaaaaaaaa
|
||||
ctcatacccc cattatgtaa aatccattgt cgcatccacc tttattatta gtctcttccc
|
||||
cacaacaata ttcatgtgcc tagaccaaga agttattatc tcgaactgac actgagccac
|
||||
aacccaaaca acccagctct ccctaagctt caaactagac tacttctcca taatattcat
|
||||
ccctgtagca ttgttcgtta catggtccat catagaattc tcactgtgat atataaactc
|
||||
agacccaaac attaatcagt tcttcaaata tctactcatt ttcctaatta ccatactaat
|
||||
cttagttacc gctaacaacc tattccaact gttcatcggc tgagagggcg taggaattat
|
||||
atccttcttg ctcatcagtt gatgatacgc ccgagcagat gccaacacag cagccattca
|
||||
agcaatccta tacaaccgca tcggcgatat cggtttcatc ctcgccttag catgatttat
|
||||
cctacactcc aactcatgag acccacaaca aatagccctt ctaaacgcta atccaagcct
|
||||
caccccacta ctaggcctcc tcctagcagc agcaggcaaa tcagcccaat taggtctcca
|
||||
cccctgactc ccctcagcca tagaaggccc caccccagtc tcagccctac tccactcaag
|
||||
cactatagtc gtagcaggag tcttcttact catccgcttc caccccctag cagaaaatag
|
||||
cccactaatc caaactctaa cactatgctt aggcgctatc accactctat tcgcagcagt
|
||||
ctgcgccctt acacaaaatg acatcaaaaa aatcgtagcc ttctccactt caagtcaact
|
||||
agggctcata gtagttacaa tcggcatcaa ccaaccacac ctagcattcc tgcacatctg
|
||||
tacccacgcc ttcttcaaag ccatactatt tatatgctcc gggtccatca tccacaacct
|
||||
taacaatgaa caagatattc gaaaaatagg aggactactc aaaaccatac ctctcacttc
|
||||
aacctccctc accattggca gcctagcatt agcaggaata cctttcctca caggtttcta
|
||||
ctccaaagac cacatcatcg aaaccgcaaa catatcatac acaaacgcct gagccctatc
|
||||
tattactctc atcgctacct ccctgacaag cgcctatagc actcgaataa ttcttctcac
|
||||
cctaacaggt caacctcgct tccccaccct cactaacatt aacgaaaata accctaccct
|
||||
actaaacccc attaaacgcc tagcagccgg aagcctattc gcaggatttc tcattactaa
|
||||
caacatttcc cccgcatccc ccttccaaac aacaatcccc ctctacctaa aactcgcagc
|
||||
cctcgctgtc actttcctag gacttctaac agccctagac ctcaactacc taaccaacaa
|
||||
acttaaaata aaaaccccac tatacacatt ttatttctcc aacatactcg ggttctaccc
|
||||
tagcatcaca caccgcacaa tcccctatct aggccttctt acgagccaaa acctgcccct
|
||||
actcctccta gacctaacct gactagaaaa gctattacct aaaacaattt cacagcacca
|
||||
aatctccgcc tccatcacca cctcaaccca aaaaggcata attaaacttt acttcctctc
|
||||
tttcttcttc ccactcatcc taaccctact cctaatcata taacctattc ccccgagcaa
|
||||
tctcaattac aacatataca ccaacaaaca atgttcaacc agtaactact actaatcaac
|
||||
gcccataatc atacaaagcc cccgcaccaa taggatcctc ccgaatcaac cctgacccct
|
||||
ctccttcata gattattcag cttcctacac tattaaagtt taccacaacc accaccccat
|
||||
catactcttt cacccacagc accaatccta cctccatcgc taaccccact aaaacactca
|
||||
ccaagacctc aacccctgac ccccatgcct caggatactc ctcaatagcc atcgctgtag
|
||||
tatatccaaa gacaaccatc attcccccta aataaattaa aaaaactatt aaacccatat
|
||||
aacctccccc aaaattcaga ataataacac acccaaccac accgctaaca atcaatacta
|
||||
aacccccata aataggagaa ggcttagaag aaaaccccac aaaccccatt actaaaccca
|
||||
cactcaacag aaacaaagca tacatcatta ttctcgcacg gactacaacc acgaccaatg
|
||||
atatgaaaaa ccatcgttgt atttcaacta caagaacacc aatgacccca atacgcaaaa
|
||||
ttaaccccct aataaaatta attaaccact cattcatcga cctccccacc ccatccaaca
|
||||
tctccgcatg atgaaacttc ggctcactcc ttggcgcctg cctgatcctc caaatcacca
|
||||
caggactatt cctagccatg cactactcac cagacgcctc gaccgccttt tcatcaatcg
|
||||
cccacatcac tcgagacgta aattatggct gaatcatccg ctaccttcac gccaatggcg
|
||||
cctcaatatt ctttatctgc ctcttcctac acatcggacg aggcctatat tacggatcat
|
||||
ttctctactc aaaaacctga aacatcggca ttatcctcct gcttgcaact atagcaacag
|
||||
ccttcatagg ctatgtcctc ccatgaggcc aaatatcatt ctgaggggcc acagtaatta
|
||||
caaacctact atccgccatc ccatacattg ggacagacct ggttcagtga atctgaggag
|
||||
gctactcagt agacagtccc accctcacac gattctttac ctttcacttt atcttaccct
|
||||
tcattattgc agccctagca gcactccacc tcctattctt gcacgaaaca ggatcaaaca
|
||||
accccctagg aatcacctcc cattccgata aaatcacctt ccacccttac tacacaatca
|
||||
aagacgccct cggcttattt ctcttccttc tctccttaat gacattaaca ctactctcac
|
||||
cagacctcct aggcgaccca gacaattata ccctagccaa ccccttaaac acccctcccc
|
||||
acatcaagcc cgaatgatat ttcctattcg cctacacaat tctccgatcc gtccctaaca
|
||||
aactaggagg cgtccttgcc ctactactat ccatcctcat cctggcaata atccccatcc
|
||||
ttcatgtatc caaacaacaa agcataatat ttcgcccact aagccaatca ctttattgac
|
||||
tcctagccgc agacctcctc attctaacct gaatcggagg acaaccagta agctaccctt
|
||||
ttatcatcat tggacaagta gcatccgtac tatacttcac aacaatccta atcctaatac
|
||||
caaccatctc cctaattgaa aacaaaatac tcaaatgggc ctgtccttgt agtataaact
|
||||
aatacaccag tcttgtaaac cggagatgaa aacctttttc caaggacaaa tcagagaaaa
|
||||
agtctttaac tccaccatta gcacccaaag ctaagattct aatttaaact attctctgtt
|
||||
ctttcatggg ggagcagatt tgggtaccac ccaagtattg actcacccat cagcaaccgc
|
||||
tatgtatttc gtacattact gccagccacc atgaatattg tacagtacca taattacttg
|
||||
actacctgca gtacataaaa acctaatcca catcaacccc ccccccccat gcttacaagc
|
||||
aagcacagca atcaaccttc aactgtcata catcaactac aactccaaag acgcccttac
|
||||
acccactagg atatcaacaa acctacccac ccttgacagt acatagcaca taaagtcatt
|
||||
taccgtacat agcacattac agtcaaatcc cttctcgccc ccatggatga cccccctcag
|
||||
ataggggtcc cttgatcacc atcctccgtg aaatcaatat cccgcacaag agtgctactc
|
||||
tcctcgctcc gggcccataa cacttggggg tagctaaagt gaactgtatc cgacatctgg
|
||||
ttcctacttc agggccataa agcctaaata gcccacacgt tccccttaaa taagacatca
|
||||
cgatg
|
||||
18693
DNA_Alignment/DNA_Alignment/neanderthal.txt_vs_GreatApes.txt.txt
Normal file
18693
DNA_Alignment/DNA_Alignment/neanderthal.txt_vs_GreatApes.txt.txt
Normal file
File diff suppressed because it is too large
Load Diff
16749
DNA_Alignment/DNA_Alignment/neanderthal.txt_vs_protypicalHuman.txt.txt
Normal file
16749
DNA_Alignment/DNA_Alignment/neanderthal.txt_vs_protypicalHuman.txt.txt
Normal file
File diff suppressed because it is too large
Load Diff
@@ -0,0 +1,5 @@
|
||||
/Users/bradybodily/Repositories/CS5050_Advanced_Algorithms/DNA_Alignment/DNA_Alignment/bin/Debug/DNA_Alignment.exe
|
||||
/Users/bradybodily/Repositories/CS5050_Advanced_Algorithms/DNA_Alignment/DNA_Alignment/bin/Debug/DNA_Alignment.pdb
|
||||
/Users/bradybodily/Repositories/CS5050_Advanced_Algorithms/DNA_Alignment/DNA_Alignment/obj/Debug/DNA_Alignment.csprojAssemblyReference.cache
|
||||
/Users/bradybodily/Repositories/CS5050_Advanced_Algorithms/DNA_Alignment/DNA_Alignment/obj/Debug/DNA_Alignment.exe
|
||||
/Users/bradybodily/Repositories/CS5050_Advanced_Algorithms/DNA_Alignment/DNA_Alignment/obj/Debug/DNA_Alignment.pdb
|
||||
Binary file not shown.
BIN
DNA_Alignment/DNA_Alignment/obj/Debug/DNA_Alignment.exe
Normal file
BIN
DNA_Alignment/DNA_Alignment/obj/Debug/DNA_Alignment.exe
Normal file
Binary file not shown.
BIN
DNA_Alignment/DNA_Alignment/obj/Debug/DNA_Alignment.pdb
Normal file
BIN
DNA_Alignment/DNA_Alignment/obj/Debug/DNA_Alignment.pdb
Normal file
Binary file not shown.
277
DNA_Alignment/DNA_Alignment/protypicalHuman.txt
Normal file
277
DNA_Alignment/DNA_Alignment/protypicalHuman.txt
Normal file
@@ -0,0 +1,277 @@
|
||||
gatcacaggt ctatcaccct attaaccact cacgggagct ctccatgcat ttggtatttt
|
||||
cgtctggggg gtatgcacgc gatagcattg cgagacgctg gagccggagc accctatgtc
|
||||
gcagtatctg tctttgattc ctgcctcatc ctattattta tcgcacctac gttcaatatt
|
||||
acaggcgaac atacttacta aagtgtgtta attaattaat gcttgtagga cataataata
|
||||
acaattgaat gtctgcacag ccactttcca cacagacatc ataacaaaaa atttccacca
|
||||
aaccccccct cccccgcttc tggccacagc acttaaacac atctctgcca aaccccaaaa
|
||||
acaaagaacc ctaacaccag cctaaccaga tttcaaattt tatcttttgg cggtatgcac
|
||||
ttttaacagt caccccccaa ctaacacatt attttcccct cccactccca tactactaat
|
||||
ctcatcaata caacccccgc ccatcctacc cagcacacac acaccgctgc taaccccata
|
||||
ccccgaacca accaaacccc aaagacaccc cccacagttt atgtagctta cctcctcaaa
|
||||
gcaatacact gaaaatgttt agacgggctc acatcacccc ataaacaaat aggtttggtc
|
||||
ctagcctttc tattagctct tagtaagatt acacatgcaa gcatccccgt tccagtgagt
|
||||
tcaccctcta aatcaccacg atcaaaagga acaagcatca agcacgcagc aatgcagctc
|
||||
aaaacgctta gcctagccac acccccacgg gaaacagcag tgattaacct ttagcaataa
|
||||
acgaaagttt aactaagcta tactaacccc agggttggtc aatttcgtgc cagccaccgc
|
||||
ggtcacacga ttaacccaag tcaatagaag ccggcgtaaa gagtgtttta gatcaccccc
|
||||
tccccaataa agctaaaact cacctgagtt gtaaaaaact ccagttgaca caaaatagac
|
||||
tacgaaagtg gctttaacat atctgaacac acaatagcta agacccaaac tgggattaga
|
||||
taccccacta tgcttagccc taaacctcaa cagttaaatc aacaaaactg ctcgccagaa
|
||||
cactacgagc cacagcttaa aactcaaagg acctggcggt gcttcatatc cctctagagg
|
||||
agcctgttct gtaatcgata aaccccgatc aacctcacca cctcttgctc agcctatata
|
||||
ccgccatctt cagcaaaccc tgatgaaggc tacaaagtaa gcgcaagtac ccacgtaaag
|
||||
acgttaggtc aaggtgtagc ccatgaggtg gcaagaaatg ggctacattt tctaccccag
|
||||
aaaactacga tagcccttat gaaacttaag ggtcgaaggt ggatttagca gtaaactaag
|
||||
agtagagtgc ttagttgaac agggccctga agcgcgtaca caccgcccgt caccctcctc
|
||||
aagtatactt caaaggacat ttaactaaaa cccctacgca tttatataga ggagacaagt
|
||||
cgtaacatgg taagtgtact ggaaagtgca cttggacgaa ccagagtgta gcttaacaca
|
||||
aagcacccaa cttacactta ggagatttca acttaacttg accgctctga gctaaaccta
|
||||
gccccaaacc cactccacct tactaccaga caaccttagc caaaccattt acccaaataa
|
||||
agtataggcg atagaaattg aaacctggcg caatagatat agtaccgcaa gggaaagatg
|
||||
aaaaattata accaagcata atatagcaag gactaacccc tataccttct gcataatgaa
|
||||
ttaactagaa ataactttgc aaggagagcc aaagctaaga cccccgaaac cagacgagct
|
||||
acctaagaac agctaaaaga gcacacccgt ctatgtagca aaatagtggg aagatttata
|
||||
ggtagaggcg acaaacctac cgagcctggt gatagctggt tgtccaagat agaatcttag
|
||||
ttcaacttta aatttgccca cagaaccctc taaatcccct tgtaaattta actgttagtc
|
||||
caaagaggaa cagctctttg gacactagga aaaaaccttg tagagagagt aaaaaattta
|
||||
acacccatag taggcctaaa agcagccacc aattaagaaa gcgttcaagc tcaacaccca
|
||||
ctacctaaaa aatcccaaac atataactga actcctcaca cccaattgga ccaatctatc
|
||||
accctataga agaactaatg ttagtataag taacatgaaa acattctcct ccgcataagc
|
||||
ctgcgtcaga ttaaaacact gaactgacaa ttaacagccc aatatctaca atcaaccaac
|
||||
aagtcattat taccctcact gtcaacccaa cacaggcatg ctcataagga aaggttaaaa
|
||||
aaagtaaaag gaactcggca aatcttaccc cgcctgttta ccaaaaacat cacctctagc
|
||||
atcaccagta ttagaggcac cgcctgccca gtgacacatg tttaacggcc gcggtaccct
|
||||
aaccgtgcaa aggtagcata atcacttgtt ccttaaatag ggacctgtat gaatggctcc
|
||||
acgagggttc agctgtctct tacttttaac cagtgaaatt gacctgcccg tgaagaggcg
|
||||
ggcataacac agcaagacga gaagacccta tggagcttta atttattaat gcaaacagta
|
||||
cctaacaaac ccacaggtcc taaactacca aacctgcatt aaaaatttcg gttggggcga
|
||||
cctcggagca gaacccaacc tccgagcagt acatgctaag acttcaccag tcaaagcgaa
|
||||
ctactatact caattgatcc aataacttga ccaacggaac aagttaccct agggataaca
|
||||
gcgcaatcct attctagagt ccatatcaac aatagggttt acgacctcga tgttggatca
|
||||
ggacatcccg atggtgcagc cgctattaaa ggttcgtttg ttcaacgatt aaagtcctac
|
||||
gtgatctgag ttcagaccgg agtaatccag gtcggtttct atctacnttc aaattcctcc
|
||||
ctgtacgaaa ggacaagaga aataaggcct acttcacaaa gcgccttccc ccgtaaatga
|
||||
tatcatctca acttagtatt atacccacac ccacccaaga acagggtttg ttaagatggc
|
||||
agagcccggt aatcgcataa aacttaaaac tttacagtca gaggttcaat tcctcttctt
|
||||
aacaacatac ccatggccaa cctcctactc ctcattgtac ccattctaat cgcaatggca
|
||||
ttcctaatgc ttaccgaacg aaaaattcta ggctatatac aactacgcaa aggccccaac
|
||||
gttgtaggcc cctacgggct actacaaccc ttcgctgacg ccataaaact cttcaccaaa
|
||||
gagcccctaa aacccgccac atctaccatc accctctaca tcaccgcccc gaccttagct
|
||||
ctcaccatcg ctcttctact atgaaccccc ctccccatac ccaaccccct ggtcaacctc
|
||||
aacctaggcc tcctatttat tctagccacc tctagcctag ccgtttactc aatcctctga
|
||||
tcagggtgag catcaaactc aaactacgcc ctgatcggcg cactgcgagc agtagcccaa
|
||||
acaatctcat atgaagtcac cctagccatc attctactat caacattact aataagtggc
|
||||
tcctttaacc tctccaccct tatcacaaca caagaacacc tctgattact cctgccatca
|
||||
tgacccttgg ccataatatg atttatctcc acactagcag agaccaaccg aacccccttc
|
||||
gaccttgccg aaggggagtc cgaactagtc tcaggcttca acatcgaata cgccgcaggc
|
||||
cccttcgccc tattcttcat agccgaatac acaaacatta ttataataaa caccctcacc
|
||||
actacaatct tcctaggaac aacatatgac gcactctccc ctgaactcta cacaacatat
|
||||
tttgtcacca agaccctact tctaacctcc ctgttcttat gaattcgaac agcatacccc
|
||||
cgattccgct acgaccaact catacacctc ctatgaaaaa acttcctacc actcacccta
|
||||
gcattactta tatgatatgt ctccataccc attacaatct ccagcattcc ccctcaaacc
|
||||
taagaaatat gtctgataaa agagttactt tgatagagta aataatagga gcttaaaccc
|
||||
ccttatttct aggactatga gaatcgaacc catccctgag aatccaaaat tctccgtgcc
|
||||
acctatcaca ccccatccta aagtaaggtc agctaaataa gctatcgggc ccataccccg
|
||||
aaaatgttgg ttataccctt cccgtactaa ttaatcccct ggcccaaccc gtcatctact
|
||||
ctaccatctt tgcaggcaca ctcatcacag cgctaagctc gcactgattt tttacctgag
|
||||
taggcctaga aataaacatg ctagctttta ttccagttct aaccaaaaaa ataaaccctc
|
||||
gttccacaga agctgccatc aagtatttcc tcacgcaagc aaccgcatcc ataatccttc
|
||||
taatagctat cctcttcaac aatatactct ccggacaatg aaccataacc aatactacca
|
||||
atcaatactc atcattaata atcataatag ctatagcaat aaaactagga atagccccct
|
||||
ttcacttctg agtcccagag gttacccaag gcacccctct gacatccggc ctgcttcttc
|
||||
tcacatgaca aaaactagcc cccatctcaa tcatatacca aatctctccc tcactaaacg
|
||||
taagccttct cctcactctc tcaatcttat ccatcatagc aggcagttga ggtggattaa
|
||||
accaaaccca gctacgcaaa atcttagcat actcctcaat tacccacata ggatgaataa
|
||||
tagcagttct accgtacaac cctaacataa ccattcttaa tttaactatt tatattatcc
|
||||
taactactac cgcattccta ctactcaact taaactccag caccacgacc ctactactat
|
||||
ctcgcacctg aaacaagcta acatgactaa cacccttaat tccatccacc ctcctctccc
|
||||
taggaggcct gcccccgcta accggctttt tgcccaaatg ggccattatc gaagaattca
|
||||
caaaaaacaa tagcctcatc atccccacca tcatagccac catcaccctc cttaacctct
|
||||
acttctacct acgcctaatc tactccacct caatcacact actccccata tctaacaacg
|
||||
taaaaataaa atgacagttt gaacatacaa aacccacccc attcctcccc acactcatcg
|
||||
cccttaccac gctactccta cctatctccc cttttatact aataatctta tagaaattta
|
||||
ggttaaatac agaccaagag ccttcaaagc cctcagtaag ttgcaatact taatttctgt
|
||||
aacagctaag gactgcaaaa ccccactctg catcaactga acgcaaatca gccactttaa
|
||||
ttaagctaag cccttactag accaatggga cttaaaccca caaacactta gttaacagct
|
||||
aagcacccta atcaactggc ttcaatctac ttctcccgcc gccgggaaaa aaggcgggag
|
||||
aagccccggc aggtttgaag ctgcttcttc gaatttgcaa ttcaatatga aaatcacctc
|
||||
ggagctggta aaaagaggcc taacccctgt ctttagattt acagtccaat gcttcactca
|
||||
gccattttac ctcaccccca ctgatgttcg ccgaccgttg actattctct acaaaccaca
|
||||
aagacattgg aacactatac ctattattcg gcgcatgagc tggagtccta ggcacagctc
|
||||
taagcctcct tattcgagcc gagctgggcc agccaggcaa ccttctaggt aacgaccaca
|
||||
tctacaacgt tatcgtcaca gcccatgcat ttgtaataat cttcttcata gtaataccca
|
||||
tcataatcgg aggctttggc aactgactag ttcccctaat aatcggtgcc cccgatatgg
|
||||
cgtttccccg cataaacaac ataagcttct gactcttacc tccctctctc ctactcctgc
|
||||
tcgcatctgc tatagtggag gccggagcag gaacaggttg aacagtctac cctcccttag
|
||||
cagggaacta ctcccaccct ggagcctccg tagacctaac catcttctcc ttacacctag
|
||||
caggtgtctc ctctatctta ggggccatca atttcatcac aacaattatc aatataaaac
|
||||
cccctgccat aacccaatac caaacgcccc tcttcgtctg atccgtccta atcacagcag
|
||||
tcctacttct cctatctctc ccagtcctag ctgctggcat cactatacta ctaacagacc
|
||||
gcaacctcaa caccaccttc ttcgaccccg ccggaggagg agaccccatt ctataccaac
|
||||
acctattctg atttttcggt caccctgaag tttatattct tatcctacca ggcttcggaa
|
||||
taatctccca tattgtaact tactactccg gaaaaaaaga accatttgga tacataggta
|
||||
tggtctgagc tatgatatca attggcttcc tagggtttat cgtgtgagca caccatatat
|
||||
ttacagtagg aatagacgta gacacacgag catatttcac ctccgctacc ataatcatcg
|
||||
ctatccccac cggcgtcaaa gtatttagct gactcgccac actccacgga agcaatatga
|
||||
aatgatctgc tgcagtgctc tgagccctag gattcatctt tcttttcacc gtaggtggcc
|
||||
tgactggcat tgtattagca aactcatcac tagacatcgt actacacgac acgtactacg
|
||||
ttgtagccca cttccactat gtcctatcaa taggagctgt atttgccatc ataggaggct
|
||||
tcattcactg atttccccta ttctcaggct acaccctaga ccaaacctac gccaaaatcc
|
||||
atttcactat catattcatc ggcgtaaatc taactttctt cccacaacac tttctcggcc
|
||||
tatccggaat gccccgacgt tactcggact accccgatgc atacaccaca tgaaacatcc
|
||||
tatcatctgt aggctcattc atttctctaa cagcagtaat attaataatt ttcatgattt
|
||||
gagaagcctt cgcttcgaag cgaaaagtcc taatagtaga agaaccctcc ataaacctgg
|
||||
agtgactata tggatgcccc ccaccctacc acacattcga agaacccgta tacataaaat
|
||||
ctagacaaaa aaggaaggaa tcgaaccccc caaagctggt ttcaagccaa ccccatggcc
|
||||
tccatgactt tttcaaaaag gtattagaaa aaccatttca taactttgtc aaagttaaat
|
||||
tataggctaa atcctatata tcttaatggc acatgcagcg caagtaggtc tacaagacgc
|
||||
tacttcccct atcatagaag agcttatcac ctttcatgat cacgccctca taatcatttt
|
||||
ccttatctgc ttcctagtcc tgtatgccct tttcctaaca ctcacaacaa aactaactaa
|
||||
tactaacatc tcagacgctc aggaaataga aaccgtctga actatcctgc ccgccatcat
|
||||
cctagtcctc atcgccctcc catccctacg catcctttac ataacagacg aggtcaacga
|
||||
tccctccctt accatcaaat caattggcca ccaatggtac tgaacctacg agtacaccga
|
||||
ctacggcgga ctaatcttca actcctacat acttccccca ttattcctag aaccaggcga
|
||||
cctgcgactc cttgacgttg acaatcgagt agtactcccg attgaagccc ccattcgtat
|
||||
aataattaca tcacaagacg tcttgcactc atgagctgtc cccacattag gcttaaaaac
|
||||
agatgcaatt cccggacgtc taaaccaaac cactttcacc gctacacgac cgggggtata
|
||||
ctacggtcaa tgctctgaaa tctgtggagc aaaccacagt ttcatgccca tcgtcctaga
|
||||
attaattccc ctaaaaatct ttgaaatagg gcccgtattt accctatagc accccctcta
|
||||
ccccctctag agcccactgt aaagctaact tagcattaac cttttaagtt aaagattaag
|
||||
agaaccaaca cctctttaca gtgaaatgcc ccaactaaat actaccgtat ggcccaccat
|
||||
aattaccccc atactcctta cactattcct catcacccaa ctaaaaatat taaacacaaa
|
||||
ctaccaccta cctccctcac caaagcccat aaaaataaaa aattataaca aaccctgaga
|
||||
accaaaatga acgaaaatct gttcgcttca ttcattgccc ccacaatcct aggcctaccc
|
||||
gccgcagtac tgatcattct atttccccct ctattgatcc ccacctccaa atatctcatc
|
||||
aacaaccgac taatcaccac ccaacaatga ctaatcaaac taacctcaaa acaaatgata
|
||||
accatacaca acactaaagg acgaacctga tctcttatac tagtatcctt aatcattttt
|
||||
attgccacaa ctaacctcct cggactcctg cctcactcat ttacaccaac cacccaacta
|
||||
tctataaacc tagccatggc catcccctta tgagcgggca cagtgattat aggctttcgc
|
||||
tctaagatta aaaatgccct agcccacttc ttaccacaag gcacacctac accccttatc
|
||||
cccatactag ttattatcga aaccatcagc ctactcattc aaccaatagc cctggccgta
|
||||
cgcctaaccg ctaacattac tgcaggccac ctactcatgc acctaattgg aagcgccacc
|
||||
ctagcaatat caaccattaa ccttccctct acacttatca tcttcacaat tctaattcta
|
||||
ctgactatcc tagaaatcgc tgtcgcctta atccaagcct acgttttcac acttctagta
|
||||
agcctctacc tgcacgacaa cacataatga cccaccaatc acatgcctat catatagtaa
|
||||
aacccagccc atgaccccta acaggggccc tctcagccct cctaatgacc tccggcctag
|
||||
ccatgtgatt tcacttccac tccataacgc tcctcatact aggcctacta accaacacac
|
||||
taaccatata ccaatgatgg cgcgatgtaa cacgagaaag cacataccaa ggccaccaca
|
||||
caccacctgt ccaaaaaggc cttcgatacg ggataatcct atttattacc tcagaagttt
|
||||
ttttcttcgc aggatttttc tgagcctttt accactccag cctagcccct accccccaat
|
||||
taggagggca ctggccccca acaggcatca ccccgctaaa tcccctagaa gtcccactcc
|
||||
taaacacatc cgtattactc gcatcaggag tatcaatcac ctgagctcac catagtctaa
|
||||
tagaaaacaa ccgaaaccaa ataattcaag cactgcttat tacaatttta ctgggtctct
|
||||
attttaccct cctacaagcc tcagagtact tcgagtctcc cttcaccatt tccgacggca
|
||||
tctacggctc aacatttttt gtagccacag gcttccacgg acttcacgtc attattggct
|
||||
caactttcct cactatctgc ttcatccgcc aactaatatt tcactttaca tccaaacatc
|
||||
actttggctt cgaagccgcc gcctgatact ggcattttgt agatgtggtt tgactatttc
|
||||
tgtatgtctc catctattga tgagggtctt actcttttag tataaatagt accgttaact
|
||||
tccaattaac tagttttgac aacattcaaa aaagagtaat aaacttcgcc ttaattttaa
|
||||
taatcaacac cctcctagcc ttactactaa taattattac attttgacta ccacaactca
|
||||
acggctacat agaaaaatcc accccttacg agtgcggctt cgaccctata tcccccgccc
|
||||
gcgtcccttt ctccataaaa ttcttcttag tagctattac cttcttatta tttgatctag
|
||||
aaattgccct ccttttaccc ctaccatgag ccctacaaac aactaacctg ccactaatag
|
||||
ttatgtcatc cctcttatta atcatcatcc tagccctaag tctggcctat gagtgactac
|
||||
aaaaaggatt agactgaacc gaattggtat atagtttaaa caaaacgaat gatttcgact
|
||||
cattaaatta tgataatcat atttaccaaa tgcccctcat ttacataaat attatactag
|
||||
catttaccat ctcacttcta ggaatactag tatatcgctc acacctcata tcctccctac
|
||||
tatgcctaga aggaataata ctatcgctgt tcattatagc tactctcata accctcaaca
|
||||
cccactccct cttagccaat attgtgccta ttgccatact agtctttgcc gcctgcgaag
|
||||
cagcggtggg cctagcccta ctagtctcaa tctccaacac atatggccta gactacgtac
|
||||
ataacctaaa cctactccaa tgctaaaact aatcgtccca acaattatat tactaccact
|
||||
gacatgactt tccaaaaaac acataatttg aatcaacaca accacccaca gcctaattat
|
||||
tagcatcatc cctctactat tttttaacca aatcaacaac aacctattta gctgttcccc
|
||||
aaccttttcc tccgaccccc taacaacccc cctcctaata ctaactacct gactcctacc
|
||||
cctcacaatc atggcaagcc aacgccactt atccagtgaa ccactatcac gaaaaaaact
|
||||
ctacctctct atactaatct ccctacaaat ctccttaatt ataacattca cagccacaga
|
||||
actaatcata ttttatatct tcttcgaaac cacacttatc cccaccttgg ctatcatcac
|
||||
ccgatgaggc aaccagccag aacgcctgaa cgcaggcaca tacttcctat tctacaccct
|
||||
agtaggctcc cttcccctac tcatcgcact aatttacact cacaacaccc taggctcact
|
||||
aaacattcta ctactcactc tcactgccca agaactatca aactcctgag ccaacaactt
|
||||
aatatgacta gcttacacaa tagcttttat agtaaagata cctctttacg gactccactt
|
||||
atgactccct aaagcccatg tcgaagcccc catcgctggg tcaatagtac ttgccgcagt
|
||||
actcttaaaa ctaggcggct atggtataat acgcctcaca ctcattctca accccctgac
|
||||
aaaacacata gcctacccct tccttgtact atccctatga ggcataatta taacaagctc
|
||||
catctgccta cgacaaacag acctaaaatc gctcattgca tactcttcaa tcagccacat
|
||||
agccctcgta gtaacagcca ttctcatcca aaccccctga agcttcaccg gcgcagtcat
|
||||
tctcataatc gcccacgggc ttacatcctc attactattc tgcctagcaa actcaaacta
|
||||
cgaacgcact cacagtcgca tcataatcct ctctcaagga cttcaaactc tactcccact
|
||||
aatagctttt tgatgacttc tagcaagcct cgctaacctc gccttacccc ccactattaa
|
||||
cctactggga gaactctctg tgctagtaac cacgttctcc tgatcaaata tcactctcct
|
||||
acttacagga ctcaacatac tagtcacagc cctatactcc ctctacatat ttaccacaac
|
||||
acaatggggc tcactcaccc accacattaa caacataaaa ccctcattca cacgagaaaa
|
||||
caccctcatg ttcatacacc tatcccccat tctcctccta tccctcaacc ccgacatcat
|
||||
taccgggttt tcctcttgta aatatagttt aaccaaaaca tcagattgtg aatctgacaa
|
||||
cagaggctta cgacccctta tttaccgaga aagctcacaa gaactgctaa ctcatgcccc
|
||||
catgtctaac aacatggctt tctcaacttt taaaggataa cagctatcca ttggtcttag
|
||||
gccccaaaaa ttttggtgca actccaaata aaagtaataa ccatgcacac tactataacc
|
||||
accctaaccc tgacttccct aattcccccc atccttacca ccctcgttaa ccctaacaaa
|
||||
aaaaactcat acccccatta tgtaaaatcc attgtcgcat ccacctttat tatcagtctc
|
||||
ttccccacaa caatattcat gtgcctagac caagaagtta ttatctcgaa ctgacactga
|
||||
gccacaaccc aaacaaccca gctctcccta agcttcaaac tagactactt ctccataata
|
||||
ttcatccctg tagcattgtt cgttacatgg tccatcatag aattctcact gtgatatata
|
||||
aactcagacc caaacattaa tcagttcttc aaatatctac tcatcttcct aattaccata
|
||||
ctaatcttag ttaccgctaa caacctattc caactgttca tcggctgaga gggcgtagga
|
||||
attatatcct tcttgctcat cagttgatga tacgcccgag cagatgccaa cacagcagcc
|
||||
attcaagcaa tcctatacaa ccgtatcggc gatatcggtt tcatcctcgc cttagcatga
|
||||
tttatcctac actccaactc atgagaccca caacaaatag cccttctaaa cgctaatcca
|
||||
agcctcaccc cactactagg cctcctccta gcagcagcag gcaaatcagc ccaattaggt
|
||||
ctccacccct gactcccctc agccatagaa ggccccaccc cagtctcagc cctactccac
|
||||
tcaagcacta tagttgtagc aggaatcttc ttactcatcc gcttccaccc cctagcagaa
|
||||
aatagcccac taatccaaac tctaacacta tgcttaggcg ctatcaccac tctgttcgca
|
||||
gcagtctgcg cccttacaca aaatgacatc aaaaaaatcg tagccttctc cacttcaagt
|
||||
caactaggac tcataatagt tacaatcggc atcaaccaac cacacctagc attcctgcac
|
||||
atctgtaccc acgccttctt caaagccata ctatttatgt gctccgggtc catcatccac
|
||||
aaccttaaca atgaacaaga tattcgaaaa ataggaggac tactcaaaac catacctctc
|
||||
acttcaacct ccctcaccat tggcagccta gcattagcag gaataccttt cctcacaggt
|
||||
ttctactcca aagaccacat catcgaaacc gcaaacatat catacacaaa cgcctgagcc
|
||||
ctatctatta ctctcatcgc tacctccctg acaagcgcct atagcactcg aataattctt
|
||||
ctcaccctaa caggtcaacc tcgcttcccc acccttacta acattaacga aaataacccc
|
||||
accctactaa accccattaa acgcctggca gccggaagcc tattcgcagg atttctcatt
|
||||
actaacaaca tttcccccgc atcccccttc caaacaacaa tccccctcta cctaaaactc
|
||||
acagccctcg ctgtcacttt cctaggactt ctaacagccc tagacctcaa ctacctaacc
|
||||
aacaaactta aaataaaatc cccactatgc acattttatt tctccaacat actcggattc
|
||||
taccctagca tcacacaccg cacaatcccc tatctaggcc ttcttacgag ccaaaacctg
|
||||
cccctactcc tcctagacct aacctgacta gaaaagctat tacctaaaac aatttcacag
|
||||
caccaaatct ccacctccat catcacctca acccaaaaag gcataattaa actttacttc
|
||||
ctctctttct tcttcccact catcctaacc ctactcctaa tcacataacc tattcccccg
|
||||
agcaatctca attacaatat atacaccaac aaacaatgtt caaccagtaa ctactactaa
|
||||
tcaacgccca taatcataca aagcccccgc accaatagga tcctcccgaa tcaaccctga
|
||||
cccctctcct tcataaatta ttcagcttcc tacactatta aagtttacca caaccaccac
|
||||
cccatcatac tctttcaccc acagcaccaa tcctacctcc atcgctaacc ccactaaaac
|
||||
actcaccaag acctcaaccc ctgaccccca tgcctcagga tactcctcaa tagccatcgc
|
||||
tgtagtatat ccaaagacaa ccatcattcc ccctaaataa attaaaaaaa ctattaaacc
|
||||
catataacct cccccaaaat tcagaataat aacacacccg accacaccgc taacaatcaa
|
||||
tactaaaccc ccataaatag gagaaggctt agaagaaaac cccacaaacc ccattactaa
|
||||
acccacactc aacagaaaca aagcatacat cattattctc gcacggacta caaccacgac
|
||||
caatgatatg aaaaaccatc gttgtatttc aactacaaga acaccaatga ccccaatacg
|
||||
caaaactaac cccctaataa aattaattaa ccactcattc atcgacctcc ccaccccatc
|
||||
caacatctcc gcatgatgaa acttcggctc actccttggc gcctgcctga tcctccaaat
|
||||
caccacagga ctattcctag ccatgcacta ctcaccagac gcctcaaccg ccttttcatc
|
||||
aatcgcccac atcactcgag acgtaaatta tggctgaatc atccgctacc ttcacgccaa
|
||||
tggcgcctca atattcttta tctgcctctt cctacacatc gggcgaggcc tatattacgg
|
||||
atcatttctc tactcagaaa cctgaaacat cggcattatc ctcctgcttg caactatagc
|
||||
aacagccttc ataggctatg tcctcccgtg aggccaaata tcattctgag gggccacagt
|
||||
aattacaaac ttactatccg ccatcccata cattgggaca gacctagttc aatgaatctg
|
||||
aggaggctac tcagtagaca gtcccaccct cacacgattc tttacctttc acttcatctt
|
||||
gcccttcatt attgcagccc tagcaacact ccacctccta ttcttgcacg aaacgggatc
|
||||
aaacaacccc ctaggaatca cctcccattc cgataaaatc accttccacc cttactacac
|
||||
aatcaaagac gccctcggct tacttctctt ccttctctcc ttaatgacat taacactatt
|
||||
ctcaccagac ctcctaggcg acccagacaa ttatacccta gccaacccct taaacacccc
|
||||
tccccacatc aagcccgaat gatatttcct attcgcctac acaattctcc gatccgtccc
|
||||
taacaaacta ggaggcgtcc ttgccctatt actatccatc ctcatcctag caataatccc
|
||||
catcctccat atatccaaac aacaaagcat aatatttcgc ccactaagcc aatcacttta
|
||||
ttgactccta gccgcagacc tcctcattct aacctgaatc ggaggacaac cagtaagcta
|
||||
cccttttacc atcattggac aagtagcatc cgtactatac ttcacaacaa tcctaatcct
|
||||
aataccaact atctccctaa ttgaaaacaa aatactcaaa tgggcctgtc cttgtagtat
|
||||
aaactaatac accagtcttg taaaccggag atgaaaacct ttttccaagg acaaatcaga
|
||||
gaaaaagtct ttaactccac cattagcacc caaagctaag attctaattt aaactattct
|
||||
ctgttctttc atggggaagc agatttgggt accacccaag tattgactca cccatcaaca
|
||||
accgctatgt atttcgtaca ttactgccag ccaccatgaa tattgtacgg taccataaat
|
||||
acttgaccac ctgtagtaca taaaaaccca atccacatca aaaccccctc cccatgctta
|
||||
caagcaagta cagcaatcaa ccctcaacta tcacacatca actgcaactc caaagccacc
|
||||
cctcacccac taggatacca acaaacctac ccacccttaa cagtacatag tacataaagc
|
||||
catttaccgt acatagcaca ttacagtcaa atcccttctc gtccccatgg atgacccccc
|
||||
tcagataggg gtcccttgac caccatcctc cgtgaaatca atatcccgca caagagtgct
|
||||
actctcctcg ctccgggccc ataacacttg ggggtagcta aagtgaactg tatccgacat
|
||||
ctggttccta cttcagggtc ataaagccta aatagcccac acgttcccct taaataagac
|
||||
atcacgatg
|
||||
@@ -0,0 +1,3 @@
|
||||
This algorithm becomes impracticle at about 25,000 entries due to memory allocation.
|
||||
|
||||
Given larger storage this algorithm is incredibly fast.
|
||||
Reference in New Issue
Block a user